RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 UTP23Q9BRU9 249 aaKnown RBP1.14□□□□□ -2.23
USP8-216ENST00000561206 REG4Q9BYZ8 158 aa1.14□□□□□ -2.23
USP8-216ENST00000561206 SRRQ9GZT4 340 aa1.14□□□□□ -2.23
USP8-216ENST00000561206 MIXL1Q9H2W2 232 aa1.14□□□□□ -2.23
USP8-216ENST00000561206 OR51B6Q9H340 312 aa1.14□□□□□ -2.23
USP8-216ENST00000561206 MYOZ1Q9NP98 299 aaPredicted RBP1.14□□□□□ -2.23
USP8-216ENST00000561206 ASCL3Q9NQ33 180 aa1.14□□□□□ -2.23
USP8-216ENST00000561206 IMP3Q9NV31 184 aaKnown RBP1.14□□□□□ -2.23
USP8-216ENST00000561206 VAPAQ9P0L0 249 aa1.14□□□□□ -2.23
USP8-216ENST00000561206 C3orf18Q9UK00 162 aa1.14□□□□□ -2.23
USP8-216ENST00000561206 SLC17A4Q9Y2C5 497 aa1.14□□□□□ -2.23
USP8-216ENST00000561206 POFUT2Q9Y2G5 429 aa1.14□□□□□ -2.23
USP8-216ENST00000561206 XRN1Q8IZH2 1706 aaKnown RBP1.14□□□□□ -2.23
USP8-216ENST00000561206 PHRF1Q9P1Y6 1649 aaKnown RBP1.14□□□□□ -2.23
USP8-216ENST00000561206 RIC1Q4ADV7 1423 aa1.14□□□□□ -2.23
USP8-216ENST00000561206 PPLO60437 1756 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 MYO5BQ9ULV0 1848 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 PARP4Q9UKK3 1724 aaKnown RBP1.13□□□□□ -2.23
USP8-216ENST00000561206 SMIM26A0A096LP01 95 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 IGHV3-49A0A0A0MS15 119 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 A0A0J9YXV3 536 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 LOC100130705A0A1B0GUX0 176 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 A0A1B0GW15 77 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 TSPAN11A1L157 253 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 TRAPPC13A5PLN9 417 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 PRORSD1PA6NEY8 169 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 FABP12A6NFH5 140 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 CEACAM18A8MTB9 384 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 BBIP1A8MTZ0 92 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 D6RAR5 112 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 SMKR1H3BMG3 65 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 K7EMT4 169 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 M0QZK8 103 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 M0R143 59 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 RFXANKO14593 260 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 GNGT2O14610 69 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 ITGB1BP1O14713 200 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 UBDO15205 165 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 LYRM1O43325 122 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 XRCC2O43543 280 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 SSNA1O43805 119 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 CDC40O60508 579 aaKnown RBP eCLIP1.13□□□□□ -2.23
USP8-216ENST00000561206 EIF4E2O60573 245 aaKnown RBP1.13□□□□□ -2.23
USP8-216ENST00000561206 CNMDO75829 334 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 GATBO75879 557 aaKnown RBP1.13□□□□□ -2.23
USP8-216ENST00000561206 PROSCO94903 275 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 AHSA1O95433 338 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 SERPINA1P01009 418 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 GCGP01275 180 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 IFNA17P01571 189 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 IGLV6-57P01721 117 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 IGHV3-11P01762 117 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 CRYBA1P05813 215 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 CD2P06729 351 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 SERPINE2P07093 398 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 RHOCP08134 193 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 TSPAN19P0C672 248 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 UBBP0CG47 229 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 RD3LP0DJH9 198 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 SLC2A1P11166 492 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 NQO2P16083 231 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 CBR1P16152 277 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 ZNF25P17030 456 aaPredicted RBP1.13□□□□□ -2.23
USP8-216ENST00000561206 GADD45AP24522 165 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 PSMB5P28074 263 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 DDTP30046 118 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 SDC2P34741 201 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 MPIP34949 423 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 ARR3P36575 388 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 CFHR2P36980 270 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 MAGEA6P43360 314 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 GPR4P46093 362 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 GCLMP48507 274 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 TGM4P49221 684 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 RPL14P50914 215 aaKnown RBP1.13□□□□□ -2.23
USP8-216ENST00000561206 CEBPGP53567 150 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 PKIAP61925 76 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 UBA52P62987 128 aaKnown RBP1.13□□□□□ -2.23
USP8-216ENST00000561206 PRR3P79522 188 aaKnown RBP1.13□□□□□ -2.23
USP8-216ENST00000561206 EMX1Q04741 257 aaPredicted RBP1.13□□□□□ -2.23
USP8-216ENST00000561206 TNFRSF9Q07011 255 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 C2orf80Q0P641 193 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 FABP9Q0Z7S8 132 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 FAM53BQ14153 422 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 ZNF235Q14590 738 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 PEA15Q15121 130 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 TAF1AQ15573 450 aaPredicted RBP1.13□□□□□ -2.23
USP8-216ENST00000561206 TRAM1Q15629 374 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 RNASE10Q5GAN6 216 aaKnown RBP1.13□□□□□ -2.23
USP8-216ENST00000561206 FAM74A1Q5RGS3 127 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 HACD4Q5VWC8 232 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 ZNF470Q6ECI4 717 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 H3F3CQ6NXT2 135 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 SCIMPQ6UWF3 145 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 LRRN1Q6UXK5 716 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 SPNS3Q6ZMD2 512 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 CERS6Q6ZMG9 384 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 NDUFAF7Q7L592 441 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 ZNF720Q7Z2F6 126 aa1.13□□□□□ -2.23
USP8-216ENST00000561206 MRPL21Q7Z2W9 205 aaKnown RBP1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms