RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ETV7Q9Y603 341 aa9.1□□□□□ -0.95
RABGGTA-216ENST00000560243 TNCP24821 2201 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 TRAV41A0A0B4J266 112 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 SLC25A17O43808 307 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 SOX15O60248 233 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 RBBP9O75884 186 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 FCER2P06734 321 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 ELANEP08246 267 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 NFYAP23511 347 aaPredicted RBP9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 SCAND1P57086 179 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 GNG2P59768 71 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 RPS16P62249 146 aaKnown RBP9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 KIAA0141Q14154 515 aaPredicted RBP9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 PLGLAQ15195 96 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 C19orf54Q5BKX5 351 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 PDPNQ86YL7 162 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 GVQW1Q8N7I0 195 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 CASTOR1Q8WTX7 329 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 P2RX4Q99571 388 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 DCSTAMPQ9H295 470 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 VCX3AQ9NNX9 186 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 SLC35D1Q9NTN3 355 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 A3GALT2U3KPV4 340 aa9.09□□□□□ -0.95
RABGGTA-216ENST00000560243 IGKV1D-13A0A0B4J2D9 117 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 LINC00473A8K010 186 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 CCL24O00175 119 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 SCGNO76038 276 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 IGLV1-40P01703 118 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 IGLV2-23P01705 113 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 APOA2P02652 100 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 SMIM18P0DKX4 95 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 IGKV1-13P0DP09 117 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 MYCNOSP40205 109 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 CDX1P47902 265 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 NCS1P62166 190 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 PITPNAQ00169 270 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 PJVKQ0ZLH3 352 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 ECSCRQ19T08 205 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 TIMM50Q3ZCQ8 353 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 ZNF660Q6AZW8 331 aaPredicted RBP9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 MINDY2Q8NBR6 621 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 BVESQ8NE79 360 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 MYOZ3Q8TDC0 251 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 FLYWCH2Q96CP2 140 aaKnown RBP9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 TSNAXQ99598 290 aaKnown RBP9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 RNF5Q99942 180 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 FAM103A1Q9BTL3 118 aaKnown RBP9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 FUNDC2Q9BWH2 189 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 AUNIPQ9H7T9 357 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 GNB4Q9HAV0 340 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 ANXA10Q9UJ72 324 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 SPATA2Q9UM82 520 aa9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 RBM7Q9Y580 266 aaKnown RBP9.08□□□□□ -0.96
RABGGTA-216ENST00000560243 SRRM4A7MD48 611 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 ARPC1BO15143 372 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 CA2P00918 260 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 IGLV2-14P01704 120 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 OR5H8P0DN80 308 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 HOXD3P31249 432 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 DUTP33316 252 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 KRTAP10-11P60412 298 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 SSBP2P81877 361 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 CNIH2Q6PI25 160 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 ABHD5Q8WTS1 349 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 DDB2Q92466 427 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 RCC1LQ96I51 464 aaKnown RBP9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 OR5B12Q96R08 314 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 NECAP2Q9NVZ3 263 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 AURKAIP1Q9NWT8 199 aaPredicted RBP9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 OR2W1Q9Y3N9 320 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 NUBP2Q9Y5Y2 271 aa9.07□□□□□ -0.96
RABGGTA-216ENST00000560243 A0A0A6YYH2 397 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 A0A1W2PN81 502 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 MEIS3P1A6NDR6 274 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 A6NJ64 397 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 SPDEFO95238 335 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 HLA-DQB1P01920 261 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 CRYGBP07316 175 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 CTXN2P0C2S0 81 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 SLC6A1P30531 599 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 CHRNA7P36544 502 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 CRIP2P52943 208 aaPredicted RBP9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 RAB25P57735 213 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 VBP1P61758 197 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 RPL30P62888 115 aaKnown RBP9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 MRGPRG-AS1Q2M3A8 158 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 TMEM177Q53S58 311 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 TMEM65Q6PI78 240 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 ZNF562Q6V9R5 426 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 PPP1R27Q86WC6 154 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 SAMD12Q8N8I0 201 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 ZNF491Q8N8L2 437 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 LFNGQ8NES3 379 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 BEST4Q8NFU0 473 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 OR13F1Q8NGS4 319 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 GRPEL2Q8TAA5 225 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 C4orf3Q8WVX3 66 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 HARBI1Q96MB7 349 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 GPHA2Q96T91 129 aa9.06□□□□□ -0.96
RABGGTA-216ENST00000560243 NAA50Q9GZZ1 169 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms