RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 CELA3BP08861 270 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 THBS3P49746 956 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 RAB9AP51151 201 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 GNB1P62873 340 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 Q56UQ5 140 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 PHYHD1Q5SRE7 291 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 FNDC7Q5VTL7 733 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 CRIP3Q6Q6R5 217 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 RAB40CQ96S21 281 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 RARRES3Q9UL19 164 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 ASXL3Q9C0F0 2248 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 PPYP01298 95 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 FRMD6-AS1P0C7T7 363 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 RPS18P62269 152 aaKnown RBP16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 HBG1P69891 147 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 HBG2P69892 147 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 EIF3IQ13347 325 aaKnown RBP16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 PSG3Q16557 428 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 ZNF721Q8TF20 911 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 Q96M66 194 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 GTSF1LQ9H1H1 148 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 LHFPL6Q9Y693 200 aa16.26■□□□□ 0.19
SEMA4B-215ENST00000560089 UBE2L5PA0A1B0GUS4 154 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 CD5LO43866 347 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 DXOO77932 396 aaKnown RBP16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 NAPSAO96009 420 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 ZNF121P58317 390 aaPredicted RBP16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 ZNF324BQ6AW86 544 aaPredicted RBP16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 C12orf54Q6X4T0 127 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 TAF15Q92804 592 aaKnown RBP eCLIP16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 CHRDL1Q9BU40 450 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 TRAV9-1A0A075B6T8 112 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 TRAV26-1A0A087WT03 109 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 H0YJW9 148 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 IAPPP10997 89 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 CRYBA4P53673 196 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 KIAA1644Q3SXP7 199 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 FLVCR1-AS1Q8TAF5 88 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 OR4C12Q96R67 309 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 IL36BQ9NZH7 164 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 GTF3C1Q12789 2109 aa16.25■□□□□ 0.19
SEMA4B-215ENST00000560089 PLPP3O14495 311 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 IGHMP01871 453 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 CEACAM3P40198 252 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 RHOBP62745 196 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 ZXDAP98168 799 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 ACSM6Q6P461 480 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 BRICD5Q6PL45 260 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 PET117Q6UWS5 81 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 CA13Q8N1Q1 262 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 STARD5Q9NSY2 213 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 NAT8BQ9UHF3 227 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 SELENOKQ9Y6D0 94 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 HCRTR1O43613 425 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 TIMP3P35625 211 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 DEFB110Q30KQ9 67 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 DOK3Q7L591 496 aa16.24■□□□□ 0.19
SEMA4B-215ENST00000560089 NUDT14O95848 222 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 UCP1P25874 307 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 GTF2H5Q6ZYL4 71 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 OR10G9Q8NGN4 311 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 OR10G7Q8NGN6 311 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 C16orf52Q8NHV5 167 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 PIGTQ969N2 578 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 SPSB1Q96BD6 273 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 GUCA1AP43080 201 aaPredicted RBP16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 PMP22Q01453 160 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 TSKUQ8WUA8 353 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 PSENENQ9NZ42 101 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 TRAPPC2LH3BP13 241 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 SLC17A3O00476 420 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 PDE6DO43924 150 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 WISP1O95388 367 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 SRD5A2P31213 254 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 SFXN3Q9BWM7 321 aa16.23■□□□□ 0.19
SEMA4B-215ENST00000560089 TRBV9A0A0B4J1U6 114 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 NPIPA5E9PKD4 350 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 DEGS1O15121 323 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 GATA2P23769 480 aaPredicted RBP16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 IGFBP7Q16270 282 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 MYO7BQ6PIF6 2116 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 OR1K1Q8NGR3 316 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 SIGMAR1Q99720 223 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 ERRFI1Q9UJM3 462 aaPredicted RBP16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 NPIPA1Q9UND3 350 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 PI4KAP42356 2102 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 CPAMD8Q8IZJ3 1885 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 ZNF816-ZNF321PA0A0X1KG74 233 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 SLC22A20A6NK97 555 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 LGALS4P56470 323 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 NXPH1P58417 271 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 HTD2P86397 168 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 OR8I2Q8N0Y5 310 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 SLC25A40Q8TBP6 338 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 APOBEC3DQ96AK3 386 aaPredicted RBP16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 GNB1LQ9BYB4 327 aa16.22■□□□□ 0.19
SEMA4B-215ENST00000560089 BHLHA15Q7RTS1 189 aaPredicted RBP16.21■□□□□ 0.19
SEMA4B-215ENST00000560089 NINJ1Q92982 152 aa16.21■□□□□ 0.19
SEMA4B-215ENST00000560089 CCDC3Q9BQI4 270 aa16.21■□□□□ 0.19
SEMA4B-215ENST00000560089 PCDH15Q96QU1 1955 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms