RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 ARFRP1Q13795 201 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 HES5Q5TA89 166 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 TMEM91Q6ZNR0 172 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 ZNF367Q7RTV3 350 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 ANKRD13BQ86YJ7 626 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 GRPEL2Q8TAA5 225 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 PHB2Q99623 299 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 AGMATQ9BSE5 352 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 ZMAT4Q9H898 229 aa9.76□□□□□ -0.85
SNX1-209ENST00000559961 RANGRFQ9HD47 186 aaPredicted RBP9.76□□□□□ -0.85
SNX1-209ENST00000559961 H3BUA1 57 aa9.75□□□□□ -0.85
SNX1-209ENST00000559961 SHOXO15266 292 aa9.75□□□□□ -0.85
SNX1-209ENST00000559961 SLC25A17O43808 307 aa9.75□□□□□ -0.85
SNX1-209ENST00000559961 IGHV3-11P01762 117 aa9.75□□□□□ -0.85
SNX1-209ENST00000559961 ZP3P21754 424 aa9.75□□□□□ -0.85
SNX1-209ENST00000559961 TMEM50BP56557 158 aa9.75□□□□□ -0.85
SNX1-209ENST00000559961 KIAA0141Q14154 515 aaPredicted RBP9.75□□□□□ -0.85
SNX1-209ENST00000559961 MOGAT2Q3SYC2 334 aa9.75□□□□□ -0.85
SNX1-209ENST00000559961 DLX4Q92988 240 aaPredicted RBP9.75□□□□□ -0.85
SNX1-209ENST00000559961 ASCL2Q99929 193 aa9.75□□□□□ -0.85
SNX1-209ENST00000559961 FAM103A1Q9BTL3 118 aaKnown RBP9.75□□□□□ -0.85
SNX1-209ENST00000559961 NKX1-2Q9UD57 310 aaPredicted RBP9.75□□□□□ -0.85
SNX1-209ENST00000559961 TRAV1-2A0A0B4J238 106 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 TMEM272A0A1B0GTI8 110 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 MPPED1O15442 326 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 CREBL2O60519 120 aaPredicted RBP9.74□□□□□ -0.85
SNX1-209ENST00000559961 ACTL6BO94805 426 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 DIRAS3O95661 229 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 AADACP22760 399 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 CRHBPP24387 322 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 MAP2K4P45985 399 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 SLURP1P55000 103 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 FABP5Q01469 135 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 VMA21Q3ZAQ7 101 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 ZNF383Q8NA42 475 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 POC5Q8NA72 575 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 OR10R2Q8NGX6 335 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 CASTOR1Q8WTX7 329 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 ADTRPQ96IZ2 230 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 CNBD2Q96M20 576 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 HARBI1Q96MB7 349 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 RSRP1Q9BUV0 290 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 PARP12Q9H0J9 701 aaKnown RBP9.74□□□□□ -0.85
SNX1-209ENST00000559961 ALX4Q9H161 411 aaPredicted RBP9.74□□□□□ -0.85
SNX1-209ENST00000559961 OR2D2Q9H210 308 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 STUB1Q9UNE7 303 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 GAB2Q9UQC2 676 aa9.74□□□□□ -0.85
SNX1-209ENST00000559961 IGHV4OR15-8A0A075B7B6 117 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 A0A087WW49 117 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 IGKV1-16P04430 117 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 RAB3BP20337 219 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 RAB6AP20340 208 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 NDPQ00604 133 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 ACSM6Q6P461 480 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 OR5T1Q8NG75 326 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 DCUN1D5Q9BTE7 237 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 ATG5Q9H1Y0 275 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 FBXO7Q9Y3I1 522 aa9.73□□□□□ -0.85
SNX1-209ENST00000559961 C3orf84H3BNL1 204 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 SOX15O60248 233 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 SCGNO76038 276 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 SLC22A5O76082 557 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 FCGR3AP08637 254 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 CTXN2P0C2S0 81 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 GSTT2P0CG29 244 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 GSTT2BP0CG30 244 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 GP9P14770 177 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 SPNP16150 400 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 GNB3P16520 340 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 TBCEQ15813 527 aaPredicted RBP9.72□□□□□ -0.85
SNX1-209ENST00000559961 PLAC9Q5JTB6 97 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 IZUMO2Q6UXV1 221 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 SGPP2Q8IWX5 399 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 CYYR1Q96J86 154 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 RHOVQ96L33 236 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 GFI1Q99684 422 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 Q9H521 79 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 COA4Q9NYJ1 87 aa9.72□□□□□ -0.85
SNX1-209ENST00000559961 TRBV6-7A0A0A0MS04 114 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 A0A0B4J203 849 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 IFITM5A6NNB3 132 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 FOXI3A8MTJ6 420 aaPredicted RBP9.71□□□□□ -0.86
SNX1-209ENST00000559961 H0Y980 276 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 EGR2P11161 476 aaPredicted RBP9.71□□□□□ -0.86
SNX1-209ENST00000559961 HIST1H1DP16402 221 aaKnown RBP9.71□□□□□ -0.86
SNX1-209ENST00000559961 C19orf54Q5BKX5 351 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 IGSF11Q5DX21 431 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 ASPHD1Q5U4P2 390 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 BVESQ8NE79 360 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 NRG4Q8WWG1 115 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 USMG5Q96IX5 58 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 PALMDQ9NP74 551 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 SDHAF2Q9NX18 166 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 PRELID3BQ9Y3B1 194 aa9.71□□□□□ -0.86
SNX1-209ENST00000559961 IGKV1-6A0A0C4DH72 117 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 TRDV1A0A1B0GX56 115 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 ANKRD34BA5PLL1 514 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 LDLRAD4O15165 306 aa9.7□□□□□ -0.86
SNX1-209ENST00000559961 MRPS14O60783 128 aaKnown RBP9.7□□□□□ -0.86
SNX1-209ENST00000559961 CD36P16671 472 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms