RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 P2RX4Q99571 388 aa11.56□□□□□ -0.56
RPL28-208ENST00000559463 RNF5Q99942 180 aa11.56□□□□□ -0.56
RPL28-208ENST00000559463 ST6GALNAC5Q9BVH7 336 aa11.56□□□□□ -0.56
RPL28-208ENST00000559463 VCX3AQ9NNX9 186 aa11.56□□□□□ -0.56
RPL28-208ENST00000559463 TPSG1Q9NRR2 321 aa11.56□□□□□ -0.56
RPL28-208ENST00000559463 TRAV41A0A0B4J266 112 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 SPDEFO95238 335 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 IGLV1-40P01703 118 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 APOA2P02652 100 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 EGR2P11161 476 aaPredicted RBP11.55□□□□□ -0.56
RPL28-208ENST00000559463 CDX1P47902 265 aaPredicted RBP11.55□□□□□ -0.56
RPL28-208ENST00000559463 CRIP2P52943 208 aaPredicted RBP11.55□□□□□ -0.56
RPL28-208ENST00000559463 GNG2P59768 71 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 CX3CL1P78423 397 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 PITPNAQ00169 270 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 KIAA0141Q14154 515 aaPredicted RBP11.55□□□□□ -0.56
RPL28-208ENST00000559463 PLGLAQ15195 96 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 ZNF660Q6AZW8 331 aaPredicted RBP11.55□□□□□ -0.56
RPL28-208ENST00000559463 DCSTAMPQ9H295 470 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 KLK15Q9H2R5 256 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 SLC35D1Q9NTN3 355 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 NECAP2Q9NVZ3 263 aa11.55□□□□□ -0.56
RPL28-208ENST00000559463 METTL1Q9UBP6 276 aaKnown RBP11.55□□□□□ -0.56
RPL28-208ENST00000559463 COL7A1Q02388 2944 aa11.54□□□□□ -0.56
RPL28-208ENST00000559463 TRAV18A0A075B6X5 111 aa11.54□□□□□ -0.56
RPL28-208ENST00000559463 IGLV2-23P01705 113 aa11.54□□□□□ -0.56
RPL28-208ENST00000559463 RPS19P39019 145 aaKnown RBP11.54□□□□□ -0.56
RPL28-208ENST00000559463 MYCNOSP40205 109 aa11.54□□□□□ -0.56
RPL28-208ENST00000559463 LSM3P62310 102 aaKnown RBP11.54□□□□□ -0.56
RPL28-208ENST00000559463 ECSCRQ19T08 205 aa11.54□□□□□ -0.56
RPL28-208ENST00000559463 MINDY2Q8NBR6 621 aa11.54□□□□□ -0.56
RPL28-208ENST00000559463 DDB2Q92466 427 aa11.54□□□□□ -0.56
RPL28-208ENST00000559463 FLYWCH2Q96CP2 140 aaKnown RBP11.54□□□□□ -0.56
RPL28-208ENST00000559463 TSNAXQ99598 290 aaKnown RBP11.54□□□□□ -0.56
RPL28-208ENST00000559463 AURKAIP1Q9NWT8 199 aaPredicted RBP11.54□□□□□ -0.56
RPL28-208ENST00000559463 SPATA2Q9UM82 520 aa11.54□□□□□ -0.56
RPL28-208ENST00000559463 A0A0A6YYH2 397 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 A6NJ64 397 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 CCL24O00175 119 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 SLC25A17O43808 307 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 SOX15O60248 233 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 TMEM127O75204 238 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 CA2P00918 260 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 NFYAP23511 347 aaPredicted RBP11.53□□□□□ -0.56
RPL28-208ENST00000559463 RPS16P62249 146 aaKnown RBP11.53□□□□□ -0.56
RPL28-208ENST00000559463 SSBP2P81877 361 aaPredicted RBP11.53□□□□□ -0.56
RPL28-208ENST00000559463 CNIH2Q6PI25 160 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 C4orf3Q8WVX3 66 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 CLCC1Q96S66 551 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 FAM103A1Q9BTL3 118 aaKnown RBP11.53□□□□□ -0.56
RPL28-208ENST00000559463 GNB4Q9HAV0 340 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 ANXA10Q9UJ72 324 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 RBM7Q9Y580 266 aaKnown RBP11.53□□□□□ -0.56
RPL28-208ENST00000559463 A3GALT2U3KPV4 340 aa11.53□□□□□ -0.56
RPL28-208ENST00000559463 IGKV1D-13A0A0B4J2D9 117 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 LINC00473A8K010 186 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 J3QRK9 145 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 DUS4LO95620 317 aaKnown RBP11.52□□□□□ -0.57
RPL28-208ENST00000559463 IGLV2-14P01704 120 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 SMIM18P0DKX4 95 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 IGKV1-13P0DP09 117 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 PTHLHP12272 177 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 DUTP33316 252 aaKnown RBP11.52□□□□□ -0.57
RPL28-208ENST00000559463 KRTAP10-11P60412 298 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 REC114Q7Z4M0 266 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 CROCCP3Q8IVE0 287 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 GVQW1Q8N7I0 195 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 ZNF491Q8N8L2 437 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 BVESQ8NE79 360 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 FUNDC2Q9BWH2 189 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 AUNIPQ9H7T9 357 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 OR2W1Q9Y3N9 320 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 NUBP2Q9Y5Y2 271 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 DNAH9Q9NYC9 4486 aa11.52□□□□□ -0.57
RPL28-208ENST00000559463 A0A1W2PN81 502 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 SRRM4A7MD48 611 aaKnown RBP11.51□□□□□ -0.57
RPL28-208ENST00000559463 ARPC1BO15143 372 aaKnown RBP11.51□□□□□ -0.57
RPL28-208ENST00000559463 HLA-DQB1P01920 261 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 CRYGBP07316 175 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 CTXN2P0C2S0 81 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 CHRNA7P36544 502 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 RAB9AP51151 201 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 FHL3Q13643 280 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 TMEM177Q53S58 311 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 ZNF562Q6V9R5 426 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 PPP1R27Q86WC6 154 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 ZNF645Q8N7E2 425 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 OR13F1Q8NGS4 319 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 ABHD5Q8WTS1 349 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 CASTOR1Q8WTX7 329 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 HARBI1Q96MB7 349 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 FOXA2Q9Y261 457 aaPredicted RBP11.51□□□□□ -0.57
RPL28-208ENST00000559463 SORL1Q92673 2214 aa11.51□□□□□ -0.57
RPL28-208ENST00000559463 I3L521 148 aa11.5□□□□□ -0.57
RPL28-208ENST00000559463 TUSC2O75896 110 aa11.5□□□□□ -0.57
RPL28-208ENST00000559463 HOXD3P31249 432 aaPredicted RBP11.5□□□□□ -0.57
RPL28-208ENST00000559463 LUMP51884 338 aaPredicted RBP11.5□□□□□ -0.57
RPL28-208ENST00000559463 RAB25P57735 213 aa11.5□□□□□ -0.57
RPL28-208ENST00000559463 NCS1P62166 190 aa11.5□□□□□ -0.57
RPL28-208ENST00000559463 TAGLNQ01995 201 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms