RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 TMEM178AQ8NBL3 297 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 RAB39BQ96DA2 213 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 CLEC5AQ9NY25 188 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 RBM7Q9Y580 266 aaKnown RBP11.3□□□□□ -0.6
CPNE6-210ENST00000558995 ATMQ13315 3056 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 IGKV1-5P01602 117 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 PTTG1IPP53801 180 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 PPP1CBP62140 327 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 SSX7Q7RTT5 188 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 SCGB1C1Q8TD33 95 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 FAM216AQ8WUB2 273 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 MBNL3Q9NUK0 354 aaKnown RBP11.3□□□□□ -0.6
CPNE6-210ENST00000558995 LIN7CQ9NUP9 197 aaKnown RBP11.3□□□□□ -0.6
CPNE6-210ENST00000558995 WIPI2Q9Y4P8 454 aa11.3□□□□□ -0.6
CPNE6-210ENST00000558995 CUL9Q8IWT3 2517 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 A0A087WWC5 75 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 GGCTO75223 188 aaKnown RBP11.29□□□□□ -0.6
CPNE6-210ENST00000558995 IRF2P14316 349 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 OR5I1Q13606 314 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 ZNF146Q15072 292 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 ZNF585BQ52M93 769 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 HEPN1Q6WQI6 88 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 ZNF429Q86V71 674 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 CYB561D1Q8N8Q1 229 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 MUCL1Q96DR8 90 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 RNF2Q99496 336 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 VPS25Q9BRG1 176 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 ZDHHC11Q9H8X9 412 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 PSENENQ9NZ42 101 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 SERTM2A0A1B0GWG4 89 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 NKX6-3A6NJ46 265 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 SH2D1BO14796 132 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 PGA5P0DJD9 388 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 CEBPGP53567 150 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 UBE2KP61086 200 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 OR2J1Q9GZK6 312 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 CDH20Q9HBT6 801 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 KCNS2Q9ULS6 477 aa11.29□□□□□ -0.6
CPNE6-210ENST00000558995 MAP1BP46821 2468 aaKnown RBP11.29□□□□□ -0.6
CPNE6-210ENST00000558995 GZMBP10144 247 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 SELEP16581 610 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 JOSD1Q15040 202 aaPredicted RBP11.28□□□□□ -0.6
CPNE6-210ENST00000558995 OR10G4Q8NGN3 311 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 VSTM5A8MXK1 200 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 H0YL77 283 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 CDIPTO14735 213 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 CELA3BP08861 270 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 IAPPP10997 89 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 RPS10P46783 165 aaKnown RBP11.28□□□□□ -0.6
CPNE6-210ENST00000558995 UBE2NP61088 152 aaKnown RBP11.28□□□□□ -0.6
CPNE6-210ENST00000558995 TGFBR3Q03167 851 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 OR8G2PQ6IF36 304 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 MYPOPQ86VE0 399 aaPredicted RBP11.28□□□□□ -0.6
CPNE6-210ENST00000558995 ZNF525Q8N782 197 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 TVP23CQ96ET8 276 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 GMPPAQ96IJ6 420 aaPredicted RBP11.28□□□□□ -0.6
CPNE6-210ENST00000558995 NIPSNAP3BQ9BS92 247 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 ELOVL1Q9BW60 279 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 RNF150Q9ULK6 438 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 SVILO95425 2214 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 LOC102723971A0A1B0GUV8 181 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 SMCO3A2RU48 225 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 WDR1O75083 606 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 HBG1P69891 147 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 HBG2P69892 147 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 DLK1P80370 383 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 DEFB109BQ30KR1 87 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 SLC35E3Q7Z769 313 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 DRAM1Q8N682 238 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 CORO2AQ92828 525 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 PSMG3Q9BT73 122 aaPredicted RBP11.28□□□□□ -0.6
CPNE6-210ENST00000558995 RSG1Q9BU20 258 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 RPRMQ9NS64 109 aa11.28□□□□□ -0.6
CPNE6-210ENST00000558995 RNF212BA8MTL3 300 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 ARL16Q0P5N6 197 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 GABRA6Q16445 453 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 UBALD1Q8TB05 177 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 CACNA1GO43497 2377 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 PTPRBP23467 1997 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 ZNF727A8MUV8 499 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 IQCF6A8MYZ5 107 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 LRRC75BQ2VPJ9 315 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 ACSF3Q4G176 576 aaPredicted RBP11.27□□□□□ -0.61
CPNE6-210ENST00000558995 OR1L6Q8NGR2 347 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 SLC25A40Q8TBP6 338 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 GNG13Q9P2W3 67 aa11.27□□□□□ -0.61
CPNE6-210ENST00000558995 FAM90A26D6RGX4 464 aa11.26□□□□□ -0.61
CPNE6-210ENST00000558995 CCL25O15444 150 aa11.26□□□□□ -0.61
CPNE6-210ENST00000558995 ERVS71-1P61550 626 aa11.26□□□□□ -0.61
CPNE6-210ENST00000558995 SERF2P84101 59 aa11.26□□□□□ -0.61
CPNE6-210ENST00000558995 ALKBH6Q3KRA9 238 aa11.26□□□□□ -0.61
CPNE6-210ENST00000558995 HAPLN4Q86UW8 402 aa11.26□□□□□ -0.61
CPNE6-210ENST00000558995 MED12LQ86YW9 2145 aa11.26□□□□□ -0.61
CPNE6-210ENST00000558995 FGFRL1Q8N441 504 aa11.26□□□□□ -0.61
CPNE6-210ENST00000558995 ZNF430Q9H8G1 570 aaPredicted RBP11.26□□□□□ -0.61
CPNE6-210ENST00000558995 KCNIP1Q9NZI2 227 aa11.26□□□□□ -0.61
CPNE6-210ENST00000558995 ELOA3CA0A087WX78 387 aaPredicted RBP11.26□□□□□ -0.61
CPNE6-210ENST00000558995 C20orf202A1L168 122 aa11.26□□□□□ -0.61
CPNE6-210ENST00000558995 HAND1O96004 215 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms