RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 ZNF260Q3ZCT1 412 aa11.71□□□□□ -0.53
SMAD6-203ENST00000558937 IGSF11Q5DX21 431 aa11.71□□□□□ -0.53
SMAD6-203ENST00000558937 C22orf42Q6IC83 251 aa11.71□□□□□ -0.53
SMAD6-203ENST00000558937 PPP1R27Q86WC6 154 aa11.71□□□□□ -0.53
SMAD6-203ENST00000558937 NR2C2APQ86WQ0 139 aa11.71□□□□□ -0.53
SMAD6-203ENST00000558937 PDPNQ86YL7 162 aa11.71□□□□□ -0.53
SMAD6-203ENST00000558937 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.71□□□□□ -0.53
SMAD6-203ENST00000558937 MAFIPQ8WZ33 124 aa11.71□□□□□ -0.53
SMAD6-203ENST00000558937 TSNAXQ99598 290 aaKnown RBP11.71□□□□□ -0.53
SMAD6-203ENST00000558937 ALX4Q9H161 411 aaPredicted RBP11.71□□□□□ -0.53
SMAD6-203ENST00000558937 TPSG1Q9NRR2 321 aa11.71□□□□□ -0.53
SMAD6-203ENST00000558937 SMIM30A4D0T7 59 aa11.7□□□□□ -0.54
SMAD6-203ENST00000558937 MRPS14O60783 128 aaKnown RBP11.7□□□□□ -0.54
SMAD6-203ENST00000558937 LGALS1P09382 135 aaKnown RBP11.7□□□□□ -0.54
SMAD6-203ENST00000558937 TMEM267Q0VDI3 215 aaPredicted RBP11.7□□□□□ -0.54
SMAD6-203ENST00000558937 UNQ5815/PRO19632Q6UWF5 114 aa11.7□□□□□ -0.54
SMAD6-203ENST00000558937 C5orf30Q96GV9 206 aa11.7□□□□□ -0.54
SMAD6-203ENST00000558937 OR2D2Q9H210 308 aa11.7□□□□□ -0.54
SMAD6-203ENST00000558937 SLC35D1Q9NTN3 355 aa11.7□□□□□ -0.54
SMAD6-203ENST00000558937 ZNF230Q9UIE0 474 aaPredicted RBP11.7□□□□□ -0.54
SMAD6-203ENST00000558937 TRBV6-7A0A0A0MS04 114 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 SLC25A17O43808 307 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 DIRAS3O95661 229 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 ATP6V1G2O95670 118 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 OR8U9P0C7N5 309 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 GALP22466 123 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 ARFRP1Q13795 201 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 ACTBL2Q562R1 376 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 UBE2UQ5VVX9 321 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 PYHIN1Q6K0P9 492 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 ZNF562Q6V9R5 426 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 LFNGQ8NES3 379 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 OR10J5Q8NHC4 309 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 DCUN1D4Q92564 292 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 ARPC1AQ92747 370 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 FLYWCH2Q96CP2 140 aaKnown RBP11.69□□□□□ -0.54
SMAD6-203ENST00000558937 SDHAF2Q9NX18 166 aa11.69□□□□□ -0.54
SMAD6-203ENST00000558937 LSM4Q9Y4Z0 139 aaKnown RBP11.69□□□□□ -0.54
SMAD6-203ENST00000558937 IGHV4OR15-8A0A075B7B6 117 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 A0A087WW49 117 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 METTL21EPA6NDL7 271 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 LINC01619G3V211 115 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 OVOL1O14753 267 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 ARPC1BO15143 372 aaKnown RBP11.68□□□□□ -0.54
SMAD6-203ENST00000558937 IGLV2-23P01705 113 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 PSMB9P28065 219 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 SLURP1P55000 103 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 AKIRIN2Q53H80 203 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 SPARTQ8N0X7 666 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 GRPEL2Q8TAA5 225 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 MS4A10Q96PG2 267 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 ZNF256Q9Y2P7 627 aaPredicted RBP11.68□□□□□ -0.54
SMAD6-203ENST00000558937 DNAH9Q9NYC9 4486 aa11.68□□□□□ -0.54
SMAD6-203ENST00000558937 IGKV1D-8A0A087WSZ0 117 aa11.67□□□□□ -0.54
SMAD6-203ENST00000558937 IGHV3-11P01762 117 aa11.67□□□□□ -0.54
SMAD6-203ENST00000558937 INSL3P51460 131 aa11.67□□□□□ -0.54
SMAD6-203ENST00000558937 TPPP2P59282 170 aa11.67□□□□□ -0.54
SMAD6-203ENST00000558937 SSBP2P81877 361 aaPredicted RBP11.67□□□□□ -0.54
SMAD6-203ENST00000558937 FXYD3Q14802 87 aa11.67□□□□□ -0.54
SMAD6-203ENST00000558937 Q6ZS49 121 aa11.67□□□□□ -0.54
SMAD6-203ENST00000558937 DLX4Q92988 240 aaPredicted RBP11.67□□□□□ -0.54
SMAD6-203ENST00000558937 GINS4Q9BRT9 223 aa11.67□□□□□ -0.54
SMAD6-203ENST00000558937 ATG5Q9H1Y0 275 aa11.67□□□□□ -0.54
SMAD6-203ENST00000558937 TXNL4BQ9NX01 149 aaKnown RBP11.67□□□□□ -0.54
SMAD6-203ENST00000558937 ELF5Q9UKW6 265 aaPredicted RBP11.67□□□□□ -0.54
SMAD6-203ENST00000558937 NOTOA8MTQ0 251 aa11.66□□□□□ -0.54
SMAD6-203ENST00000558937 LY86O95711 162 aa11.66□□□□□ -0.54
SMAD6-203ENST00000558937 CRYGBP07316 175 aa11.66□□□□□ -0.54
SMAD6-203ENST00000558937 FGF9P31371 208 aaPredicted RBP11.66□□□□□ -0.54
SMAD6-203ENST00000558937 TALDO1P37837 337 aa11.66□□□□□ -0.54
SMAD6-203ENST00000558937 SRSF7Q16629 238 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMAD6-203ENST00000558937 H1FOOQ8IZA3 346 aaPredicted RBP11.66□□□□□ -0.54
SMAD6-203ENST00000558937 BVESQ8NE79 360 aa11.66□□□□□ -0.54
SMAD6-203ENST00000558937 FCGR1BQ92637 280 aa11.66□□□□□ -0.54
SMAD6-203ENST00000558937 HARBI1Q96MB7 349 aa11.66□□□□□ -0.54
SMAD6-203ENST00000558937 SLA2Q9H6Q3 261 aa11.66□□□□□ -0.54
SMAD6-203ENST00000558937 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMAD6-203ENST00000558937 STUB1Q9UNE7 303 aa11.66□□□□□ -0.54
SMAD6-203ENST00000558937 RBM7Q9Y580 266 aaKnown RBP11.66□□□□□ -0.54
SMAD6-203ENST00000558937 SORL1Q92673 2214 aa11.66□□□□□ -0.54
SMAD6-203ENST00000558937 SAP30O75446 220 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 TRGV3P03979 118 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 DTYMKP23919 212 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 CD40LGP29965 261 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 LGALS7P47929 136 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 PJVKQ0ZLH3 352 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 CBX3Q13185 183 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 ARL6IP1Q15041 203 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 TMEM177Q53S58 311 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 ZNF429Q86V71 674 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 POC5Q8NA72 575 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 RHOVQ96L33 236 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 Q9H521 79 aa11.65□□□□□ -0.54
SMAD6-203ENST00000558937 SHOXO15266 292 aa11.64□□□□□ -0.55
SMAD6-203ENST00000558937 CNIH1O95406 144 aa11.64□□□□□ -0.55
SMAD6-203ENST00000558937 HSPB1P04792 205 aaKnown RBP11.64□□□□□ -0.55
SMAD6-203ENST00000558937 TAGLNQ01995 201 aaKnown RBP11.64□□□□□ -0.55
SMAD6-203ENST00000558937 RTL8BQ17RB0 113 aa11.64□□□□□ -0.55
SMAD6-203ENST00000558937 CDNFQ49AH0 187 aa11.64□□□□□ -0.55
SMAD6-203ENST00000558937 DDB2Q92466 427 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms