RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 CENPOQ9BU64 300 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 CLEC7AQ9BXN2 247 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 PECRQ9BY49 303 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 BARHL1Q9BZE3 327 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 DPAGT1Q9H3H5 408 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 C16orf95Q9H693 158 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 LINC00574Q9H8X3 128 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 TAF9BQ9HBM6 251 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 ISYNA1Q9NPH2 558 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 PLSCR3Q9NRY6 295 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 TXNL4BQ9NX01 149 aaKnown RBP3.34□□□□□ -1.87
SPG11-211ENST00000558561 TAS2R3Q9NYW6 316 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 RCC2Q9P258 522 aaKnown RBP3.34□□□□□ -1.87
SPG11-211ENST00000558561 DPM3Q9P2X0 92 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 GLS2Q9UI32 602 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 ZNF230Q9UIE0 474 aaPredicted RBP3.34□□□□□ -1.87
SPG11-211ENST00000558561 AK3Q9UIJ7 227 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 TCF19Q9Y242 345 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 POMT1Q9Y6A1 747 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 FBN3Q75N90 2809 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 NOTCH3Q9UM47 2321 aa3.34□□□□□ -1.87
SPG11-211ENST00000558561 TET2Q6N021 2002 aaPredicted RBP3.34□□□□□ -1.88
SPG11-211ENST00000558561 A0A075B6Q4 140 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 SAA2-SAA4A0A096LPE2 208 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 TRDV1A0A1B0GX56 115 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 A0A1W2PPI3 338 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 VGLL3A8MV65 326 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 MCRIP1C9JLW8 97 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 AIPO00170 330 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 SDCBPO00560 298 aaPredicted RBP3.33□□□□□ -1.88
SPG11-211ENST00000558561 FCN1O00602 326 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 SLC17A2O00624 439 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 TOR1AO14656 332 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 CSN2P05814 226 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 SNRNP70P08621 437 aaKnown RBP3.33□□□□□ -1.88
SPG11-211ENST00000558561 GSTT2P0CG29 244 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 GSTT2BP0CG30 244 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 GNB3P16520 340 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 FUT3P21217 361 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 PSMB9P28065 219 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 CD34P28906 385 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 SDC2P34741 201 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 PPP1CCP36873 323 aaKnown RBP3.33□□□□□ -1.88
SPG11-211ENST00000558561 KIR2DS4P43632 304 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 TAS2R43P59537 309 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 ABCA11PQ4W5N1 156 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 NHLRC3Q5JS37 347 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 GLT8D1Q68CQ7 371 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 DHRS7BQ6IAN0 325 aaPredicted RBP3.33□□□□□ -1.88
SPG11-211ENST00000558561 SPSB3Q6PJ21 355 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 CD200R1LQ6Q8B3 271 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 MOB3BQ86TA1 216 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 ZNF329Q86UD4 541 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 FAM89BQ8N5H3 189 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 TEX29Q8N6K0 151 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 ZNF565Q8N9K5 539 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 CHST4Q8NCG5 386 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 OR56B4Q8NH76 319 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 OR9G1Q8NH87 305 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 SETD6Q8TBK2 473 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 NEK7Q8TDX7 302 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 CAPSLQ8WWF8 208 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 FAM3DQ96BQ1 224 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 C5orf30Q96GV9 206 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 ABHD14BQ96IU4 210 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 S100A13Q99584 98 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 TM2D1Q9BX74 207 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 NAA50Q9GZZ1 169 aaKnown RBP3.33□□□□□ -1.88
SPG11-211ENST00000558561 MMP28Q9H239 520 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 VCXQ9H320 206 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 BEX1Q9HBH7 125 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 OR1A1Q9P1Q5 309 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 TRAPPC2LQ9UL33 140 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 TBL2Q9Y4P3 447 aaKnown RBP3.33□□□□□ -1.88
SPG11-211ENST00000558561 MMP24Q9Y5R2 645 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 V9GY05 133 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 TNCP24821 2201 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 MGAM2Q2M2H8 2515 aa3.33□□□□□ -1.88
SPG11-211ENST00000558561 IGHV1-3A0A0C4DH29 117 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 TMEM30CPA0ZSE6 113 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 KRTAP29-1A8MX34 341 aaPredicted RBP3.32□□□□□ -1.88
SPG11-211ENST00000558561 LEUTXA8MZ59 168 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 M0QZ24 198 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 SPINT2O43291 252 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 ORC5O43913 435 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 PDCD6O75340 191 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 OR2C1O95371 312 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 SCGB1D1O95968 90 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 NAPSAO96009 420 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 IGKV1D-33P01593 117 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 IGKV1-33P01594 117 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 CD36P16671 472 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 GZMHP20718 246 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 GABRA5P31644 462 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 HSPA13P48723 471 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 PRRX1P54821 245 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 MED21Q13503 144 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 HERPUD1Q15011 391 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 RAB11BQ15907 218 aa3.32□□□□□ -1.88
SPG11-211ENST00000558561 MPV17LQ2QL34 196 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms