RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 NEUROG1Q92886 237 aa8.76□□□□□ -1.01
TPM1-210ENST00000558264 AIFM2Q9BRQ8 373 aa8.76□□□□□ -1.01
TPM1-210ENST00000558264 CALYQ9NYX4 217 aa8.76□□□□□ -1.01
TPM1-210ENST00000558264 SPTBN4Q9H254 2564 aa8.76□□□□□ -1.01
TPM1-210ENST00000558264 MARCH11A6NNE9 402 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 K7ENP7 123 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 WNT2P09544 360 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 H2AFB1P0C5Y9 115 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 RAB5CP51148 216 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 RPS23P62266 143 aaKnown RBP8.75□□□□□ -1.01
TPM1-210ENST00000558264 TLE1Q04724 770 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 SPSB3Q6PJ21 355 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 CLRN3Q8NCR9 226 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 CD300LFQ8TDQ1 290 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 OR4C12Q96R67 309 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 LRRC30A6NM36 301 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 TRIM77I1YAP6 450 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 MMP23AO75900 390 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 OR9G9P0C7N8 305 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 GZMHP20718 246 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 FGF8P55075 233 aaPredicted RBP8.75□□□□□ -1.01
TPM1-210ENST00000558264 LOXL3P58215 753 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 TAS2R30P59541 319 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 ADIPOQQ15848 244 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 ZBTB34Q8NCN2 500 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 PPP1R35Q8TAP8 253 aa8.75□□□□□ -1.01
TPM1-210ENST00000558264 YLPM1P49750 1951 aaKnown RBP8.74□□□□□ -1.01
TPM1-210ENST00000558264 DYSFO75923 2080 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 M0R036 132 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 TMPRSS2O15393 492 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 ADH4P08319 380 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 SNRNP70P08621 437 aaKnown RBP8.74□□□□□ -1.01
TPM1-210ENST00000558264 DUTP33316 252 aaKnown RBP8.74□□□□□ -1.01
TPM1-210ENST00000558264 CFHR2P36980 270 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 HTD2P86397 168 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 SLC38A11Q08AI6 406 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 PEA15Q15121 130 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 C17orf58Q2M2W7 97 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 LCN15Q6UWW0 184 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 SSX7Q7RTT5 188 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 Q8TCH9 128 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 SCGB1C1Q8TD33 95 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 R3HDM4Q96D70 268 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 GNPNAT1Q96EK6 184 aaPredicted RBP8.74□□□□□ -1.01
TPM1-210ENST00000558264 QTRT1Q9BXR0 403 aaKnown RBP8.74□□□□□ -1.01
TPM1-210ENST00000558264 IFI27L2Q9H2X8 130 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 IL19Q9UHD0 177 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 RAXQ9Y2V3 346 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 TRGV8A0A0C4DH27 118 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 CEBPZOSA8MTT3 80 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 HMGB3O15347 200 aaKnown RBP8.74□□□□□ -1.01
TPM1-210ENST00000558264 DFFBO76075 338 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 P0C879 139 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 MSMO1Q15800 293 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 TCF23Q7RTU1 214 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 DTD1Q8TEA8 209 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 C14orf79Q96F83 325 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 WFIKKN1Q96NZ8 548 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 GAFA1Q96PS6 74 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 RPS10P5Q9NQ39 176 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 HSPB7Q9UBY9 170 aa8.74□□□□□ -1.01
TPM1-210ENST00000558264 TRAV3A0A0B4J244 114 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 UMAD1C9J7I0 102 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 NDUFB7P17568 137 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 AWAT1Q58HT5 328 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 STUMQ69YW2 141 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 EDARADDQ8WWZ3 215 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 HSD17B10Q99714 261 aaKnown RBP8.73□□□□□ -1.01
TPM1-210ENST00000558264 RPRMQ9NS64 109 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.73□□□□□ -1.01
TPM1-210ENST00000558264 JPT1Q9UK76 154 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 DEFA4P12838 97 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 TNFSF4P23510 183 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 HBG1P69891 147 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 HBG2P69892 147 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 CT45A1Q5HYN5 189 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 PRAMEF5Q5TYX0 476 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 CT45A3Q8NHU0 189 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 RXFP4Q8TDU9 374 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 CCL17Q92583 94 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 ISOC2Q96AB3 205 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 TOLLIPQ9H0E2 274 aa8.73□□□□□ -1.01
TPM1-210ENST00000558264 PUS1Q9Y606 427 aaKnown RBP eCLIP8.73□□□□□ -1.01
TPM1-210ENST00000558264 PIGBOS1A0A0B4J2F0 54 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 RBFOX3A6NFN3 312 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 IFNA17P01571 189 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 IRF2P14316 349 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 PTAFRP25105 342 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 GATA4P43694 442 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 C3orf36Q3SXR2 165 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 TRAT1Q6PIZ9 186 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 ZNF66Q6ZN08 573 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 LYG1Q8N1E2 194 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 ZNF561Q8N587 486 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 PBDC1Q9BVG4 233 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 OR6C3Q9NZP0 311 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 GNG13Q9P2W3 67 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 KPTNQ9Y664 436 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 SAA2-SAA4A0A096LPE2 208 aa8.72□□□□□ -1.01
TPM1-210ENST00000558264 ZFP92A6NM28 416 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms