RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ROM1Q03395 351 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PITX3O75364 302 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 SMIM21Q3B7S5 101 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 NABP2Q9BQ15 211 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 CLEC7AQ9BXN2 247 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PDFQ9HBH1 243 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 SORL1Q92673 2214 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 FAM157AC9JC47 383 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 IL3RAP26951 378 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 SLC25A40Q8TBP6 338 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 WFDC12Q8WWY7 111 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 TCFL5Q9UL49 500 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 MYH7BA7E2Y1 1941 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 LRRC30A6NM36 301 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 A8MWV9 139 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 RPS20P60866 119 aaKnown RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 HIST1H1AQ02539 215 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-248ENST00000558190 RTP5Q14D33 572 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 TMEM215Q68D42 235 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 DOLPP1Q86YN1 238 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 FER1L6-AS2Q96M78 137 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 C19orf24Q9BVV8 132 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 LPAR2Q9HBW0 351 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 MYH8P13535 1937 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PPIAL4EA0A075B759 164 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 RRHO14718 337 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 PPIAL4FP0DN26 164 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 LHX2P50458 406 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 WFDC2Q14508 124 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 ASPHD2Q6ICH7 369 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 OR5AN1Q8NGI8 311 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 MRGPRX1Q96LB2 322 aa3.18□□□□□ -1.9
ATXN3-248ENST00000558190 TSPAN2O60636 221 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 ZNF703Q9H7S9 590 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 CEACAM18A8MTB9 384 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 DNASE2BQ8WZ79 361 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 CD38P28907 300 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 FOLR3P41439 243 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 NOXO1Q8NFA2 376 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 NEO1Q92859 1461 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 PMELP40967 661 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 RPL23P62829 140 aaKnown RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 PRICKLE4Q2TBC4 344 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 TMEM95Q3KNT9 176 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 VN1R2Q8NFZ6 395 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 AICDAQ9GZX7 198 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 SEPSECSQ9HD40 501 aaKnown RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 HEATR5BQ9P2D3 2071 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 B4GALT1P15291 398 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 VKORC1L1Q8N0U8 176 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 C5orf30Q96GV9 206 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 ODAMA1E959 279 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 HLA-DQA1P01909 254 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 MRPL16Q9NX20 251 aaKnown RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 CT62P0C5K7 136 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 RPL8P62917 257 aaKnown RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 OCIAD1Q9NX40 245 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 ITSN1Q15811 1721 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 KBTBD11-OT1A0A1B0GTJ5 212 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 PXMP4Q9Y6I8 212 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 CA11O75493 328 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 ELSPBP1Q96BH3 223 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 A0A087WV48 116 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 NRG2O14511 850 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 SSBP2P81877 361 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 RAX2Q96IS3 184 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 MAP1LC3AQ9H492 121 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 SSPNQ14714 243 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 ARHGEF40Q8TER5 1519 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 H0YIG0 161 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 IFITM1P13164 125 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 PSG9Q00887 426 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 ELOVL5Q9NYP7 299 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 TRAV8-4A0A0B4J246 113 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 GOSR1O95249 250 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 FAM53BQ14153 422 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 OR8B12Q8NGG6 310 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 J3KRW8 73 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 CDIPTO14735 213 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 ATP6V0BQ99437 205 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 H3BRM9 83 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 TBC1D28Q2M2D7 210 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 KCNE4Q8WWG9 221 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 TRAV5A0A0B4J249 113 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 S1PR2O95136 353 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 WISP3O95389 354 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 C8orf88P0DMB2 117 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 EVI2AP22794 236 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 GGTLC2Q14390 218 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 FBXW9Q5XUX1 488 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 KIR3DL3Q8N743 410 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 NFAM1Q8NET5 270 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 TRACP01848 142 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 TDGF1P13385 188 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 ZP4Q12836 540 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 INO80CQ6PI98 192 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.17□□□□□ -1.9
ATXN3-248ENST00000558190 CITED2Q99967 270 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-248ENST00000558190 SEC11AP67812 179 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms