RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 MALLQ13021 153 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 CNN3Q15417 329 aaKnown RBP9.23□□□□□ -0.93
USP3-206ENST00000558157 OCIAD2Q56VL3 154 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 SPIN3Q5JUX0 258 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 CLEC2AQ6UVW9 174 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.23□□□□□ -0.93
USP3-206ENST00000558157 LRP11Q86VZ4 500 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 BAGE3Q86Y29 109 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 BAGE2Q86Y30 109 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 CALHM1Q8IU99 346 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 PIGTQ969N2 578 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 TXNDC17Q9BRA2 123 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 EML6Q6ZMW3 1958 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 DCHS1Q96JQ0 3298 aa9.23□□□□□ -0.93
USP3-206ENST00000558157 CHD3Q12873 2000 aaKnown RBP9.22□□□□□ -0.93
USP3-206ENST00000558157 IGHV2-26A0A0B4J1V2 119 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 TMEM238C9JI98 176 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 NKX2-8O15522 239 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 TSPOP30536 169 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 ARF6P62330 175 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 C17orf67Q0P5P2 114 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 TESK1Q15569 626 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 TMEM249Q2WGJ8 235 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 GPR146Q96CH1 333 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 SFRP2Q96HF1 295 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 FER1L6-AS2Q96M78 137 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 SH2D2AQ9NP31 389 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 TUBG2Q9NRH3 451 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 SLC7A10Q9NS82 523 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 ASPMQ8IZT6 3477 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 LOC102725191A0A1B0GVB3 256 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 GRIFINA4D1Z8 144 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 LIPT2A6NK58 231 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 G3V3Y1 287 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 K7ERU9 68 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 DEGS1O15121 323 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 SYNGR2O43760 224 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 SUMO3P55854 103 aaPredicted RBP9.22□□□□□ -0.93
USP3-206ENST00000558157 LHFPL2Q6ZUX7 228 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 MCEMP1Q8IX19 187 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 OSR2Q8N2R0 312 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 LSM10Q969L4 123 aaKnown RBP9.22□□□□□ -0.93
USP3-206ENST00000558157 NUDT11Q96G61 164 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 CST9LQ9H4G1 147 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 PSENENQ9NZ42 101 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 FBXL7Q9UJT9 491 aa9.22□□□□□ -0.93
USP3-206ENST00000558157 PHF3Q92576 2039 aaKnown RBP9.22□□□□□ -0.93
USP3-206ENST00000558157 MDFIC2A0A1B0GVS7 189 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 CTXN2P0C2S0 81 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 PMCHL1Q16048 86 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 OR10J3Q5JRS4 329 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 FFAR4Q5NUL3 377 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 ZNF818PQ6ZRF7 136 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 GAPTQ8N292 157 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 OR2M7Q8NG81 312 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 EMC6Q9BV81 110 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 SCNM1Q9BWG6 230 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 PROK2Q9HC23 129 aa9.21□□□□□ -0.93
USP3-206ENST00000558157 CELSR3Q9NYQ7 3312 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 IGLV3-32A0A0A0MS00 114 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 LRP5LA4QPB2 252 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 OR5B21A6NL26 309 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 H3BP45 60 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 TUSC2O75896 110 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 KRTDAPP60985 99 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 COX19Q49B96 90 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 C19orf35Q6ZS72 473 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 OR4C12Q96R67 309 aa9.21□□□□□ -0.94
USP3-206ENST00000558157 MRPL18Q9H0U6 180 aaKnown RBP9.21□□□□□ -0.94
USP3-206ENST00000558157 MED13Q9UHV7 2174 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 C11orf94C9JXX5 98 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 E9PLN8 166 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 KITLGP21583 273 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 ANOS1P23352 680 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 OTX1P32242 354 aaPredicted RBP9.2□□□□□ -0.94
USP3-206ENST00000558157 HIST3H3Q16695 136 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 ABHD17BQ5VST6 288 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 UNQ5815/PRO19632Q6UWF5 114 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 GJC3Q8NFK1 279 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 OR2M3Q8NG83 312 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 KCNIP2Q9NS61 270 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 PPIAL4AQ9Y536 164 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 SPTBN2O15020 2390 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 A0A0G2JMM0 328 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 A0A1W2PPB8 328 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 A0A1W2PRS3 328 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 IGLC7A0M8Q6 106 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 FAM90A10PA6NDY2 464 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 FAM90A18PA6NE21 464 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 FAM90A16PA6NEW6 464 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 FAM90A20PA6NIJ5 464 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 FAM90A8PA6NJQ4 464 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 FAM90A7PA6NKC0 464 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 FAM90A22PA8MWA6 464 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 KIR3DP1A8MWS1 328 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 FAM90A12PA8MX19 464 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 FAM90A5PA8MXJ8 464 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 FAM90A23PA8MXZ1 464 aa9.2□□□□□ -0.94
USP3-206ENST00000558157 C17orf112F2Z3M2 114 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms