RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GBX2P52951 348 aaPredicted RBP3.88□□□□□ -1.79
SPG11-208ENST00000558155 APOC4P55056 127 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 TCTAP57738 103 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 RELQ04864 619 aaPredicted RBP3.88□□□□□ -1.79
SPG11-208ENST00000558155 ATP5G2Q06055 141 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 GNMTQ14749 295 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 FAM209BQ5JX69 171 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 DDI2Q5TDH0 399 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 MEDAGQ5VYS4 303 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 KDM4DQ6B0I6 523 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 GLDNQ6ZMI3 551 aaPredicted RBP3.88□□□□□ -1.79
SPG11-208ENST00000558155 LINC00336Q6ZUF6 198 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 LHFPL3Q86UP9 236 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 OR52B4Q8NGK2 314 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 GPR148Q8TDV2 347 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 PDCD1LG2Q9BQ51 273 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 THTPAQ9BU02 230 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 PARP12Q9H0J9 701 aaKnown RBP3.88□□□□□ -1.79
SPG11-208ENST00000558155 WFDC10AQ9H1F0 79 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 ZC4H2Q9NQZ6 224 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 COA4Q9NYJ1 87 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 TAS2R4Q9NYW5 299 aa3.88□□□□□ -1.79
SPG11-208ENST00000558155 A0A1W2PP11 408 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 TCRBV3S1A0A5B6 114 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 C2orf70A6NJV1 201 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 LGALS9O00182 355 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 ITGB1BP1O14713 200 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 GGCTO75223 188 aaKnown RBP3.87□□□□□ -1.79
SPG11-208ENST00000558155 SC5DO75845 299 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 TUSC2O75896 110 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 APOA2P02652 100 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 T-ENOLP0DO92 83 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 S100A1P23297 94 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 POLR2IP36954 125 aaKnown RBP3.87□□□□□ -1.79
SPG11-208ENST00000558155 EWSR1Q01844 656 aaKnown RBP eCLIP3.87□□□□□ -1.79
SPG11-208ENST00000558155 FLOT2Q14254 428 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 SMUG1Q53HV7 270 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 RPL39P5Q59GN2 51 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 SLC25A30Q5SVS4 291 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 ZNF57Q68EA5 555 aaPredicted RBP3.87□□□□□ -1.79
SPG11-208ENST00000558155 DMKNQ6E0U4 476 aaPredicted RBP3.87□□□□□ -1.79
SPG11-208ENST00000558155 SLC38A6Q8IZM9 456 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 SYS1Q8N2H4 156 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 STPG3Q8N7X2 389 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 IL1F10Q8WWZ1 152 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 WDR89Q96FK6 387 aaPredicted RBP3.87□□□□□ -1.79
SPG11-208ENST00000558155 PHB2Q99623 299 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 SULT4A1Q9BR01 284 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 SELENOIQ9C0D9 397 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 IFI27L2Q9H2X8 130 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 ISG20L2Q9H9L3 353 aaKnown RBP3.87□□□□□ -1.79
SPG11-208ENST00000558155 IMPAD1Q9NX62 359 aa3.87□□□□□ -1.79
SPG11-208ENST00000558155 EXOGQ9Y2C4 368 aaKnown RBP3.87□□□□□ -1.79
SPG11-208ENST00000558155 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.86□□□□□ -1.79
SPG11-208ENST00000558155 TRAV25A0A0B4J276 109 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 KIR2DL5BA0A0G2JN68 375 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 KIR2DL5BA0A0G2JPC4 375 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 MSGN1A6NI15 193 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 FAM223BA6NKX1 122 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 E9PI62 339 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 H3BNX3 289 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 J3KRW8 73 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 BMPR1BO00238 502 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 MPPED1O15442 326 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 OR9G9P0C7N8 305 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 CBLN1P23435 193 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 FASP25445 335 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 CEACAM6P40199 344 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 SNRPGP62308 76 aaKnown RBP3.86□□□□□ -1.79
SPG11-208ENST00000558155 RHOGP84095 191 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 ZNF45Q02386 682 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 RIPK1Q13546 671 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 FAM106AQ4KMX7 169 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 TM4SF20Q53R12 229 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 GLT8D1Q68CQ7 371 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 RPL22L1Q6P5R6 122 aaKnown RBP3.86□□□□□ -1.79
SPG11-208ENST00000558155 GLIPR1L1Q6UWM5 242 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 RBPMS2Q6ZRY4 209 aaKnown RBP3.86□□□□□ -1.79
SPG11-208ENST00000558155 C5orf24Q7Z6I8 188 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 PDPNQ86YL7 162 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 GPHB5Q86YW7 130 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 FAM223AQ8IWN6 122 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 CDH26Q8IXH8 852 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 SPARTQ8N0X7 666 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 KIR2DL5AQ8N109 375 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 ADAD2Q8NCV1 583 aaKnown RBP3.86□□□□□ -1.79
SPG11-208ENST00000558155 KIR2DL5BQ8NHK3 375 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 MRPL30Q8TCC3 161 aaKnown RBP3.86□□□□□ -1.79
SPG11-208ENST00000558155 C2CD4CQ8TF44 421 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 FBLIM1Q8WUP2 373 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 FAM46BQ96A09 425 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 RNF183Q96D59 192 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 ABHD14BQ96IU4 210 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 NEDD4LQ96PU5 975 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 OR14A2Q96R54 314 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 ZNF184Q99676 751 aaPredicted RBP3.86□□□□□ -1.79
SPG11-208ENST00000558155 CIB1Q99828 191 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 MFFQ9GZY8 342 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 GABARAPL1Q9H0R8 117 aa3.86□□□□□ -1.79
SPG11-208ENST00000558155 BANF2Q9H503 90 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms