RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 FABP12A6NFH5 140 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 GABARAPH6UMI1 98 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 FGF16O43320 207 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 PEX14O75381 377 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 IGLV2-14P01704 120 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 VSIG10L2P0DP72 767 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 S100A5P33763 92 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 THBS3P49746 956 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 Q8N2B8 174 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 Q8N9W7 124 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 GIMAP1Q8WWP7 306 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 GPHA2Q96T91 129 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 SLC5A7Q9GZV3 580 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 CCL28Q9NRJ3 127 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 SLC35D1Q9NTN3 355 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 SERTAD4Q9NUC0 356 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 RBMX2Q9Y388 322 aaKnown RBP11.39□□□□□ -0.59
USP3-205ENST00000557884 A3GALT2U3KPV4 340 aa11.39□□□□□ -0.59
USP3-205ENST00000557884 LINC00473A8K010 186 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 TNFSF12O43508 249 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 SLC22A5O76082 557 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 IGKV1-16P04430 117 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 MC5RP33032 325 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 DUTP33316 252 aaKnown RBP11.38□□□□□ -0.59
USP3-205ENST00000557884 KRTAP10-3P60369 221 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 TSPAN5P62079 268 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 MRPS10P82664 201 aaKnown RBP11.38□□□□□ -0.59
USP3-205ENST00000557884 OR2B11Q5JQS5 317 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 ZNF660Q6AZW8 331 aaPredicted RBP11.38□□□□□ -0.59
USP3-205ENST00000557884 KLHDC1Q8N7A1 406 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 BVESQ8NE79 360 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 OR8H1Q8NGG4 311 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 SMIM4Q8WVI0 70 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 RASL11BQ9BPW5 248 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 SOSTQ9BQB4 213 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 ZNF747Q9BV97 191 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 TINAGL1Q9GZM7 467 aaPredicted RBP11.38□□□□□ -0.59
USP3-205ENST00000557884 TAS2R8Q9NYW2 309 aa11.38□□□□□ -0.59
USP3-205ENST00000557884 NBR2O15453 112 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 CD3DP04234 171 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 RPS16P62249 146 aaKnown RBP11.37□□□□□ -0.59
USP3-205ENST00000557884 RPL30P62888 115 aaKnown RBP11.37□□□□□ -0.59
USP3-205ENST00000557884 ACTBL2Q562R1 376 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 PYDC2Q56P42 97 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 RNASE10Q5GAN6 216 aaKnown RBP11.37□□□□□ -0.59
USP3-205ENST00000557884 HIST2H2BDQ6DRA6 164 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 DHRS11Q6UWP2 260 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 PDPNQ86YL7 162 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 OR6F1Q8NGZ6 308 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 MOB3AQ96BX8 217 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 ADTRPQ96IZ2 230 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 FXYD6Q9H0Q3 95 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 RABL2AQ9UBK7 228 aaPredicted RBP11.37□□□□□ -0.59
USP3-205ENST00000557884 RABL2BQ9UNT1 228 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 V9GYH0 126 aa11.37□□□□□ -0.59
USP3-205ENST00000557884 A6NHS1 94 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 CTDSPLO15194 276 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 IFNA6P05013 189 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 PLGLAQ15195 96 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 RTL8BQ17RB0 113 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 VAX1Q5SQQ9 334 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 ZNF818PQ6ZRF7 136 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 KCTD9Q7L273 389 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 CCDC190Q86UF4 302 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 FAM71E2Q8N5Q1 922 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 C11orf44Q8N8P7 122 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 TMEM229BQ8NBD8 167 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 OR4D10Q8NGI6 311 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 OR6Q1Q8NGQ2 317 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 TCTEX1D2Q8WW35 142 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 DDB2Q92466 427 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 FLYWCH2Q96CP2 140 aaKnown RBP11.36□□□□□ -0.59
USP3-205ENST00000557884 FBXL15Q9H469 300 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 LIN7CQ9NUP9 197 aaKnown RBP11.36□□□□□ -0.59
USP3-205ENST00000557884 KIAA1456Q9P272 454 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 LINC00527Q9UJ94 153 aa11.36□□□□□ -0.59
USP3-205ENST00000557884 TRRAPQ9Y4A5 3859 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 LINC01548A6NM66 108 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 GSTZ1O43708 216 aaPredicted RBP11.35□□□□□ -0.59
USP3-205ENST00000557884 FCGR3BO75015 233 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 RAB3DO95716 219 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 CRYZL1O95825 349 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 TAS2R19P59542 299 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 CBX3Q13185 183 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 EIF4EBP1Q13541 118 aaPredicted RBP11.35□□□□□ -0.59
USP3-205ENST00000557884 C5orf64Q2M2E5 130 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 FAAP20Q6NZ36 180 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 STEAP1BQ6NZ63 245 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 SLC35E3Q7Z769 313 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 NPBQ8NG41 125 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 HARBI1Q96MB7 349 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 NOL4LQ96MY1 436 aaPredicted RBP11.35□□□□□ -0.59
USP3-205ENST00000557884 TSNAXQ99598 290 aaKnown RBP11.35□□□□□ -0.59
USP3-205ENST00000557884 HSPB9Q9BQS6 159 aa11.35□□□□□ -0.59
USP3-205ENST00000557884 RRHO14718 337 aa11.34□□□□□ -0.59
USP3-205ENST00000557884 SHOXO15266 292 aa11.34□□□□□ -0.59
USP3-205ENST00000557884 NDUFA3O95167 84 aa11.34□□□□□ -0.59
USP3-205ENST00000557884 RRASP10301 218 aa11.34□□□□□ -0.59
USP3-205ENST00000557884 TBPP20226 339 aa11.34□□□□□ -0.59
USP3-205ENST00000557884 GNRHRP30968 328 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms