RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 APOA2P02652 100 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 CLEC2LP0C7M8 214 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 DTYMKP23919 212 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 RAB9AP51151 201 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 CRIP2P52943 208 aaPredicted RBP13.02□□□□□ -0.33
NEDD4-212ENST00000557845 RAB25P57735 213 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 NDPQ00604 133 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 MXD1Q05195 221 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 HACD4Q5VWC8 232 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 ZNF562Q6V9R5 426 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 ZNF491Q8N8L2 437 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 FLYWCH2Q96CP2 140 aaKnown RBP13.02□□□□□ -0.33
NEDD4-212ENST00000557845 CLCC1Q96S66 551 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 TSNAXQ99598 290 aaKnown RBP13.02□□□□□ -0.33
NEDD4-212ENST00000557845 GINS4Q9BRT9 223 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 ST6GALNAC5Q9BVH7 336 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 SLC35D1Q9NTN3 355 aa13.02□□□□□ -0.33
NEDD4-212ENST00000557845 SCGNO76038 276 aa13.01□□□□□ -0.33
NEDD4-212ENST00000557845 EGR2P11161 476 aaPredicted RBP13.01□□□□□ -0.33
NEDD4-212ENST00000557845 TMEM267Q0VDI3 215 aaPredicted RBP13.01□□□□□ -0.33
NEDD4-212ENST00000557845 ECSCRQ19T08 205 aa13.01□□□□□ -0.33
NEDD4-212ENST00000557845 ZNF260Q3ZCT1 412 aa13.01□□□□□ -0.33
NEDD4-212ENST00000557845 C19orf54Q5BKX5 351 aa13.01□□□□□ -0.33
NEDD4-212ENST00000557845 H1FOOQ8IZA3 346 aaPredicted RBP13.01□□□□□ -0.33
NEDD4-212ENST00000557845 OR11H1Q8NG94 326 aa13.01□□□□□ -0.33
NEDD4-212ENST00000557845 LGALS14Q8TCE9 139 aa13.01□□□□□ -0.33
NEDD4-212ENST00000557845 DPF1Q92782 380 aa13.01□□□□□ -0.33
NEDD4-212ENST00000557845 VSIG4Q9Y279 399 aa13.01□□□□□ -0.33
NEDD4-212ENST00000557845 RBM7Q9Y580 266 aaKnown RBP13.01□□□□□ -0.33
NEDD4-212ENST00000557845 A0A1W2PN81 502 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 I3L521 148 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 K7EIL1 84 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 SOX15O60248 233 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 SPDEFO95238 335 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 CHRNA7P36544 502 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 PITPNAQ00169 270 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 TCTEX1D1Q8N7M0 179 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 OR5M8Q8NGP6 311 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 ABHD5Q8WTS1 349 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 C5orf30Q96GV9 206 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 DCSTAMPQ9H295 470 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 GNB4Q9HAV0 340 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 A3GALT2U3KPV4 340 aa13□□□□□ -0.33
NEDD4-212ENST00000557845 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 TMEM235A6NFC5 223 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 CA2P00918 260 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 LGALS7P47929 136 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 SCAND1P57086 179 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 RUNX1Q01196 453 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 TAGLNQ01995 201 aaKnown RBP12.99□□□□□ -0.33
NEDD4-212ENST00000557845 FHL3Q13643 280 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 AKIRIN2Q53H80 203 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 IDNKQ5T6J7 187 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 PPP1R27Q86WC6 154 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 OR1N2Q8NGR9 330 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 OR5H6Q8NGV6 325 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 FAM103A1Q9BTL3 118 aaKnown RBP12.99□□□□□ -0.33
NEDD4-212ENST00000557845 RHBDL2Q9NX52 303 aa12.99□□□□□ -0.33
NEDD4-212ENST00000557845 FOXA2Q9Y261 457 aaPredicted RBP12.99□□□□□ -0.33
NEDD4-212ENST00000557845 SLC25A17O43808 307 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 IGLV2-23P01705 113 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 CTXN2P0C2S0 81 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 GNG2P59768 71 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 ACTBL2Q562R1 376 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 DEFB121Q5J5C9 76 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 UNQ5815/PRO19632Q6UWF5 114 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 BVESQ8NE79 360 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 LFNGQ8NES3 379 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 NUDCD2Q8WVJ2 157 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 OR5B12Q96R08 314 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 TPSG1Q9NRR2 321 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 ETV7Q9Y603 341 aa12.98□□□□□ -0.33
NEDD4-212ENST00000557845 J3QRK9 145 aa12.97□□□□□ -0.33
NEDD4-212ENST00000557845 SSX5O60225 188 aa12.97□□□□□ -0.33
NEDD4-212ENST00000557845 CRYGBP07316 175 aa12.97□□□□□ -0.33
NEDD4-212ENST00000557845 RRASP10301 218 aa12.97□□□□□ -0.33
NEDD4-212ENST00000557845 DUTP33316 252 aaKnown RBP12.97□□□□□ -0.33
NEDD4-212ENST00000557845 FXYD3Q14802 87 aa12.97□□□□□ -0.33
NEDD4-212ENST00000557845 TMEM177Q53S58 311 aa12.97□□□□□ -0.33
NEDD4-212ENST00000557845 CNIH2Q6PI25 160 aa12.97□□□□□ -0.33
NEDD4-212ENST00000557845 CASTOR1Q8WTX7 329 aa12.97□□□□□ -0.33
NEDD4-212ENST00000557845 DDB2Q92466 427 aa12.97□□□□□ -0.33
NEDD4-212ENST00000557845 SLC25A38Q96DW6 304 aa12.97□□□□□ -0.33
NEDD4-212ENST00000557845 ZMAT5Q9UDW3 170 aaKnown RBP12.97□□□□□ -0.33
NEDD4-212ENST00000557845 TRAV18A0A075B6X5 111 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 SRRM4A7MD48 611 aaKnown RBP12.96□□□□□ -0.33
NEDD4-212ENST00000557845 ARPC1BO15143 372 aaKnown RBP12.96□□□□□ -0.33
NEDD4-212ENST00000557845 SHOXO15266 292 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 TMEM127O75204 238 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 HLA-DQB1P01920 261 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 NFYAP23511 347 aaPredicted RBP12.96□□□□□ -0.33
NEDD4-212ENST00000557845 GNB1P62873 340 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 ZNF616Q08AN1 781 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 CBX3Q13185 183 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 RTL8BQ17RB0 113 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 C9orf66Q5T8R8 295 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 ASPHD1Q5U4P2 390 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 PYHIN1Q6K0P9 492 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 TSPAN14Q8NG11 270 aa12.96□□□□□ -0.33
NEDD4-212ENST00000557845 ARPC1AQ92747 370 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms