RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 IP6K3Q96PC2 410 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 TBX5Q99593 518 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 B9D2Q9BPU9 175 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 DDA1Q9BW61 102 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 TSSK6Q9BXA6 273 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 PLA2G12AQ9BZM1 189 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 GABARAPL1Q9H0R8 117 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 ZNF286AQ9HBT8 521 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 DAZ1Q9NQZ3 744 aaKnown RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 PRTFDC1Q9NRG1 225 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 RSL24D1Q9UHA3 163 aaKnown RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 SMPXQ9UHP9 88 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 AK3Q9UIJ7 227 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 MRPS16Q9Y3D3 137 aaKnown RBP2.46□□□□□ -2.02
TDP1-217ENST00000557782 RFNGQ9Y644 331 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 ATAD5Q96QE3 1844 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 DSCAML1Q8TD84 2053 aa2.46□□□□□ -2.02
TDP1-217ENST00000557782 IGSF9BQ9UPX0 1349 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 DICER1Q9UPY3 1922 aaKnown RBP2.45□□□□□ -2.02
TDP1-217ENST00000557782 FAM236DA0A1B0GTK5 79 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 PPP5D1E7EU14 171 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 BET1O15155 118 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 MED6O75586 246 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 LHBP01229 141 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 HLA-DRB1P01911 266 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 IL4P05112 153 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 CD7P09564 240 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 FAM236CP0DP71 79 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 ATP6V0CP27449 155 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 TAS2R45P59539 299 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 HSPE1P61604 102 aaKnown RBP2.45□□□□□ -2.02
TDP1-217ENST00000557782 RUNX1Q01196 453 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 TNFRSF9Q07011 255 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 BSPH1Q075Z2 132 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 SMARCD3Q6STE5 483 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 SGPP2Q8IWX5 399 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 C1orf174Q8IYL3 243 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 ZNF615Q8N8J6 731 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 OR52L1Q8NGH7 329 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 UBALD1Q8TB05 177 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 GNPDA2Q8TDQ7 276 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 CT55Q8WUE5 264 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 FRZBQ92765 325 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 ROPN1LQ96C74 230 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 LINC00477Q96M19 166 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 CCL13Q99616 98 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 C1QTNF6Q9BXI9 259 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 COMMD5Q9GZQ3 224 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 OR2D2Q9H210 308 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 CXorf21Q9HAI6 301 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 GPR84Q9NQS5 396 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 BATF3Q9NR55 127 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 CISHQ9NSE2 258 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 C14orf105Q9NVL8 296 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 CMTM6Q9NX76 183 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 TP53TG3Q9ULZ0 132 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 PYCARDQ9ULZ3 195 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 UTP11Q9Y3A2 253 aaKnown RBP2.45□□□□□ -2.02
TDP1-217ENST00000557782 TRAPPC1Q9Y5R8 145 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 CROCCQ5TZA2 2017 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 DOCK3Q8IZD9 2030 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 MTUS2Q5JR59 1369 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 OTOFQ9HC10 1997 aa2.45□□□□□ -2.02
TDP1-217ENST00000557782 ZNF638Q14966 1978 aaKnown RBP2.44□□□□□ -2.02
TDP1-217ENST00000557782 THADAQ6YHU6 1953 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 LOC105371267A0A1B0GV96 52 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 EXOC1LA0A1B0GW35 172 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 ZNF850A8MQ14 1090 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 CRYZL1O95825 349 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 SULT1A3P0DMM9 295 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 SULT1A4P0DMN0 295 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 CBR1P16152 277 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 SERPINB1P30740 379 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 DAPP51397 102 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 FGF12P61328 243 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 GNG3P63215 75 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 ZNF816Q0VGE8 651 aaPredicted RBP2.44□□□□□ -2.02
TDP1-217ENST00000557782 IL15RAQ13261 267 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 KCNJ8Q15842 424 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 UNQ9165/PRO28630Q6UXU0 137 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 SCXQ7RTU7 201 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 SAXO1Q8IYX7 474 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 UMODL1-AS1Q8N2C9 162 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 SLC22A24Q8N4F4 322 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 TMEM105Q8N8V8 129 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 GDPD1Q8N9F7 314 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 OR11G2Q8NGC1 345 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 OR11H6Q8NGC7 330 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 OR8B12Q8NGG6 310 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 RTN4IP1Q8WWV3 396 aaPredicted RBP2.44□□□□□ -2.02
TDP1-217ENST00000557782 OR5P3Q8WZ94 311 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 TMEM147Q9BVK8 224 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 NKX6-2Q9C056 277 aaPredicted RBP2.44□□□□□ -2.02
TDP1-217ENST00000557782 LINC00574Q9H8X3 128 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 ZNF586Q9NXT0 402 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 ZNF230Q9UIE0 474 aaPredicted RBP2.44□□□□□ -2.02
TDP1-217ENST00000557782 RPUSD1Q9UJJ7 312 aaKnown RBP2.44□□□□□ -2.02
TDP1-217ENST00000557782 UFC1Q9Y3C8 167 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 PHLDA3Q9Y5J5 127 aa2.44□□□□□ -2.02
TDP1-217ENST00000557782 RTL1A6NKG5 1358 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms