RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 ARID1AO14497 2285 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 IGHV3-43A0A0B4J1X8 118 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 A0A0B4J293 547 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 LY6LH3BQJ8 138 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 HSD17B6O14756 317 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 CCNKO75909 580 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 OR5AC1P0C628 307 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 IGHV3-43DP0DP04 118 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 TMEM249Q2WGJ8 235 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 PHLDA2Q53GA4 152 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 VMO1Q7Z5L0 202 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 MRPL41Q8IXM3 137 aaKnown RBP8.56□□□□□ -1.04
GABRB3-213ENST00000557765 SPAG16Q8N0X2 631 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 ADAD2Q8NCV1 583 aaKnown RBP8.56□□□□□ -1.04
GABRB3-213ENST00000557765 OR4P4Q8NGL7 312 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 TCTEX1D2Q8WW35 142 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 CAPSLQ8WWF8 208 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 C18orf12Q96KH6 178 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 C2orf50Q96LR7 162 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 NARFLQ9H6Q4 476 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 HIF1ANQ9NWT6 349 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 WASHC3Q9Y3C0 194 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 MMP24Q9Y5R2 645 aa8.56□□□□□ -1.04
GABRB3-213ENST00000557765 VGLL3A8MV65 326 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 FAM157AC9JC47 383 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 M0R1X1 148 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 RLN2P04090 185 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 AARDQ4LEZ3 155 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 TMEM177Q53S58 311 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 C9orf139Q6ZV77 190 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 ZNF429Q86V71 674 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 OR52E5Q8NH55 327 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 LHX4Q969G2 390 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 FLYWCH2Q96CP2 140 aaKnown RBP8.55□□□□□ -1.04
GABRB3-213ENST00000557765 HYLS1Q96M11 299 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 Q96MF0 132 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 TSNAXQ99598 290 aaKnown RBP8.55□□□□□ -1.04
GABRB3-213ENST00000557765 ZNF436Q9C0F3 470 aaPredicted RBP8.55□□□□□ -1.04
GABRB3-213ENST00000557765 C7orf69Q9H7B7 122 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 C1RLQ9NZP8 487 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 CENPEQ02224 2701 aa8.55□□□□□ -1.04
GABRB3-213ENST00000557765 SPG11Q96JI7 2443 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 APCP25054 2843 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 MARCH11A6NNE9 402 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 MED6O75586 246 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 MMP23AO75900 390 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 ARG1P05089 322 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
GABRB3-213ENST00000557765 PI3P19957 117 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 MAS1LP35410 378 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 AKR1C2P52895 323 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 EBI3Q14213 229 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 LTC4SQ16873 150 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 PDLIM3Q53GG5 364 aaPredicted RBP8.54□□□□□ -1.04
GABRB3-213ENST00000557765 TPTE2P1Q5T6R2 138 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 TMEM268Q5VZI3 342 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 SPNS3Q6ZMD2 512 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 C16orf82Q7Z2V1 217 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 HSD17B13Q7Z5P4 300 aaPredicted RBP8.54□□□□□ -1.04
GABRB3-213ENST00000557765 FOXRED2Q8IWF2 684 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 PNKDQ8N490 385 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 NANPQ8TBE9 248 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 CASTOR1Q8WTX7 329 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 NRGNQ92686 78 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 FYTTD1Q96QD9 318 aaKnown RBP8.54□□□□□ -1.04
GABRB3-213ENST00000557765 TP53RKQ96S44 253 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 NABP2Q9BQ15 211 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 SEC22CQ9BRL7 303 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 PDCD10Q9BUL8 212 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 MEGF9Q9H1U4 602 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 SLC35D1Q9NTN3 355 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 BET1LQ9NYM9 111 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 MGAT4CQ9UBM8 478 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 PITPNC1Q9UKF7 332 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 ZNF257Q9Y2Q1 563 aa8.54□□□□□ -1.04
GABRB3-213ENST00000557765 FASNP49327 2511 aaKnown RBP8.53□□□□□ -1.04
GABRB3-213ENST00000557765 IGHV1-69DA0A0B4J2H0 117 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 IGHV1-3A0A0C4DH29 117 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 RNF223E7ERA6 249 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 H0YJW9 148 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 M0QZK8 103 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 PROP1O75360 226 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 TGFAP01135 160 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 IGHV1-69P01742 117 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 FBP1P09467 338 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 FAM106CPP0CH98 169 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 CT45A6P0DMU7 189 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 CT45A5P0DMU8 189 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 CT45A7P0DMV0 189 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 PVALBP20472 110 aaPredicted RBP8.53□□□□□ -1.04
GABRB3-213ENST00000557765 HNF1AP20823 631 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 COMPP49747 757 aaPredicted RBP8.53□□□□□ -1.04
GABRB3-213ENST00000557765 GNG10P50151 68 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 TAS2R30P59541 319 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 SMCO1Q147U7 214 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 VMA21Q3ZAQ7 101 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 NMSQ5H8A3 153 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 H2BFWTQ7Z2G1 175 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 KRTAP1-3Q8IUG1 177 aa8.53□□□□□ -1.04
GABRB3-213ENST00000557765 SELENOHQ8IZQ5 122 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms