RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 CT45A6P0DMU7 189 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 CT45A5P0DMU8 189 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 CT45A7P0DMV0 189 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 IGKV1-13P0DP09 117 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 DUTP33316 252 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 RTL8BQ17RB0 113 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 RPL39P5Q59GN2 51 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 OR4C16Q8NGL9 310 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 OR56B4Q8NH76 319 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 ZFAND1Q8TCF1 268 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 CD300LFQ8TDQ1 290 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 SECTM1Q8WVN6 248 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 CAPSLQ8WWF8 208 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 MRPL20Q9BYC9 149 aaKnown RBP11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 ESM1Q9NQ30 184 aa11.33□□□□□ -0.6
SUPT16H-208ENST00000557652 H0YJW9 148 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 RBFOX2O43251 390 aaKnown RBP eCLIP11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 PROP1O75360 226 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 B3GALNT1O75752 331 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 CRYBA1P05813 215 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 SNRNP70P08621 437 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 ZNF735P0CB33 412 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 IL7P13232 177 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 REG1BP48304 166 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 FXYD4P59646 89 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 DIAPH2-AS1Q14236 149 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 AADACL3Q5VUY0 350 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 OR4C13Q8NGP0 309 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 RBM14Q96PK6 669 aaKnown RBP11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 SDHCQ99643 169 aaPredicted RBP11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 AIFM2Q9BRQ8 373 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 RSRP1Q9BUV0 290 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 CHIAQ9BZP6 476 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 NF1P21359 2839 aa11.32□□□□□ -0.6
SUPT16H-208ENST00000557652 GPR137BO60478 399 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 SPDEFO95238 335 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 IGKV1D-33P01593 117 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 IGKV1-33P01594 117 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 IGLV2-14P01704 120 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 TMEM11P17152 192 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 GNRHRP30968 328 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 LGALS7P47929 136 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 RND3P61587 244 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 EIF4EBP1Q13541 118 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 HES1Q14469 280 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 ZNF57Q68EA5 555 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 KCTD9Q7L273 389 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 Q8N6K4 173 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 POC5Q8NA72 575 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 DDB2Q92466 427 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 EAF1Q96JC9 268 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 SLC25A21Q9BQT8 299 aaPredicted RBP11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 NPFFR1Q9GZQ6 430 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 FXYD6Q9H0Q3 95 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 CCL28Q9NRJ3 127 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 MOB4Q9Y3A3 225 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 TNCP24821 2201 aa11.31□□□□□ -0.6
SUPT16H-208ENST00000557652 A0A1B0GUS0 222 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 BAK1Q16611 211 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 KRTAP21-3Q3LHN1 58 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 SCGB2B2Q4G0G5 96 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 ZNF818PQ6ZRF7 136 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 CCDC71LQ8N9Z2 235 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 ZNF383Q8NA42 475 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 OR4D10Q8NGI6 311 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 OSR1Q8TAX0 266 aaPredicted RBP11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 TSNAXQ99598 290 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 SLC25A33Q9BSK2 321 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 HRASLSQ9HDD0 168 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 SLC35D1Q9NTN3 355 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 LIN7CQ9NUP9 197 aaKnown RBP11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 MCUBQ9NWR8 336 aa11.3□□□□□ -0.6
SUPT16H-208ENST00000557652 PIGBOS1A0A0B4J2F0 54 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 H7C2Y5 167 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 NDUFA7O95182 113 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 CTSDP07339 412 aaPredicted RBP11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 ABCA11PQ4W5N1 156 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 TMEM177Q53S58 311 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 C11orf88Q6PI97 169 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 IDO2Q6ZQW0 420 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 PRIMA1Q86XR5 153 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 CADM3Q8N126 398 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 NPBQ8NG41 125 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 OR51S1Q8NGJ8 323 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 OR4S2Q8NH73 311 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 TMEM158Q8WZ71 300 aa11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 C14orf166Q9Y224 244 aaKnown RBP11.29□□□□□ -0.6
SUPT16H-208ENST00000557652 FAM181BA6NEQ2 426 aa11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 J3QRK9 145 aa11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 PLXNB1O43157 2135 aa11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 TSPAN9O75954 239 aa11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 PGAM2P15259 253 aa11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 RBMS2Q15434 407 aaKnown RBP11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 LY6EQ16553 131 aa11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 TCTEX1D2Q8WW35 142 aa11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 C5orf30Q96GV9 206 aa11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 SLC2A9Q9NRM0 540 aa11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 KIAA1456Q9P272 454 aa11.28□□□□□ -0.6
SUPT16H-208ENST00000557652 IGHV3-72A0A0B4J1Y9 119 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms