RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 RITA1Q96K30 269 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 TSNAXQ99598 290 aaKnown RBP9.87□□□□□ -0.83
SLIRP-211ENST00000557623 CITED2Q99967 270 aaPredicted RBP9.87□□□□□ -0.83
SLIRP-211ENST00000557623 NECAP2Q9NVZ3 263 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 ZNF107Q9UII5 783 aaPredicted RBP9.87□□□□□ -0.83
SLIRP-211ENST00000557623 SCOCQ9UIL1 159 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 TCRBV4S1A1TA0A5B7 111 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 RRHO14718 337 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 HPGDSO60760 199 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 SPDEFO95238 335 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 TSPAN15O95858 294 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 HLA-DRB1P01911 266 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 HLA-DQB1P01920 261 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 RRASP10301 218 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 PTHLHP12272 177 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 NFYAP23511 347 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-211ENST00000557623 CNTFRP26992 372 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 PRSS3P35030 304 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 PLGLAQ15195 96 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 C5orf64Q2M2E5 130 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 NSUN5P1Q3KNT7 163 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 LIN54Q6MZP7 749 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 OR4F17Q8NGA8 305 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 FLYWCH2Q96CP2 140 aaKnown RBP9.86□□□□□ -0.83
SLIRP-211ENST00000557623 NOL4LQ96MY1 436 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-211ENST00000557623 OR4F4Q96R69 305 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 SLC35D1Q9NTN3 355 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 ZNF580Q9UK33 172 aa9.86□□□□□ -0.83
SLIRP-211ENST00000557623 TSSC4Q9Y5U2 329 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-211ENST00000557623 FAM25AB3EWG3 89 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 FAM25CB3EWG5 89 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 FAM25GB3EWG6 89 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 TUSC2O75896 110 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 IGF1P05019 195 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 OR5H8P0DN80 308 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 ELK1P19419 428 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 VDAC1P21796 283 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 RPS16P62249 146 aaKnown RBP9.85□□□□□ -0.83
SLIRP-211ENST00000557623 RTL8BQ17RB0 113 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 ZNF329Q86UD4 541 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 OR5AP2Q8NGF4 316 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 RBMXL1Q96E39 390 aaKnown RBP9.85□□□□□ -0.83
SLIRP-211ENST00000557623 HSPB9Q9BQS6 159 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 LINC00527Q9UJ94 153 aa9.85□□□□□ -0.83
SLIRP-211ENST00000557623 MRPS7Q9Y2R9 242 aaKnown RBP9.85□□□□□ -0.83
SLIRP-211ENST00000557623 MEIS3P1A6NDR6 274 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 LINC01548A6NM66 108 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 J3QRK9 145 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 SULT1C2O00338 296 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 IGKV1-16P04430 117 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 FCGR2CP31995 323 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 DUTP33316 252 aaKnown RBP9.84□□□□□ -0.83
SLIRP-211ENST00000557623 LGALS7P47929 136 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 LINC00205P59089 165 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 TAS2R46P59540 309 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 CDK10Q15131 360 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 TCTEX1D4Q5JR98 221 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 ZNF660Q6AZW8 331 aaPredicted RBP9.84□□□□□ -0.83
SLIRP-211ENST00000557623 HIST2H2BDQ6DRA6 164 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 TEX38Q6PEX7 206 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 FAM110DQ8TAY7 271 aaPredicted RBP9.84□□□□□ -0.83
SLIRP-211ENST00000557623 SNAPC3Q92966 411 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 OR51J1Q9H342 316 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 FBXL15Q9H469 300 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 SCPEP1Q9HB40 452 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 ZFP57Q9NU63 452 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 METTL1Q9UBP6 276 aaKnown RBP9.84□□□□□ -0.83
SLIRP-211ENST00000557623 ADAM30Q9UKF2 790 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 ANAPC10Q9UM13 185 aa9.84□□□□□ -0.83
SLIRP-211ENST00000557623 RBMX2Q9Y388 322 aaKnown RBP9.84□□□□□ -0.83
SLIRP-211ENST00000557623 IGHV7-81A0A0B4J1V7 117 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 IGKV1D-13A0A0B4J2D9 117 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 TPPPO94811 219 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 FCER2P06734 321 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 IGKV1-13P0DP09 117 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 NAT1P18440 290 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 SPCS2Q15005 226 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 PSG5Q15238 335 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 MSMO1Q15800 293 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 TMEM177Q53S58 311 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 KHDC1LQ5JSQ8 128 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 C10orf99Q6UWK7 81 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 BVESQ8NE79 360 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 GPX8Q8TED1 209 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 C15orf40Q8WUR7 153 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 GIMAP1Q8WWP7 306 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 DDB2Q92466 427 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 R3HDM4Q96D70 268 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 C5orf30Q96GV9 206 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 HSD17B10Q99714 261 aaKnown RBP9.83□□□□□ -0.84
SLIRP-211ENST00000557623 CCDC59Q9P031 241 aaKnown RBP9.83□□□□□ -0.84
SLIRP-211ENST00000557623 EXTL2Q9UBQ6 330 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 PRELID3BQ9Y3B1 194 aa9.83□□□□□ -0.84
SLIRP-211ENST00000557623 A0A1W2PRX2 142 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 SHOXO15266 292 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 PPYP01298 95 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 ELANEP08246 267 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 PF4V1P10720 104 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 AADACP22760 399 aa9.82□□□□□ -0.84
SLIRP-211ENST00000557623 SLC6A1P30531 599 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms