RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 C5orf64Q2M2E5 130 aa9.86□□□□□ -0.83
SLIRP-209ENST00000557342 NSUN5P1Q3KNT7 163 aa9.86□□□□□ -0.83
SLIRP-209ENST00000557342 LIN54Q6MZP7 749 aa9.86□□□□□ -0.83
SLIRP-209ENST00000557342 OR4F17Q8NGA8 305 aa9.86□□□□□ -0.83
SLIRP-209ENST00000557342 DYNC2LI1Q8TCX1 351 aa9.86□□□□□ -0.83
SLIRP-209ENST00000557342 FLYWCH2Q96CP2 140 aaKnown RBP9.86□□□□□ -0.83
SLIRP-209ENST00000557342 NOL4LQ96MY1 436 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-209ENST00000557342 OR4F4Q96R69 305 aa9.86□□□□□ -0.83
SLIRP-209ENST00000557342 SLC35D1Q9NTN3 355 aa9.86□□□□□ -0.83
SLIRP-209ENST00000557342 PTTG2Q9NZH5 202 aa9.86□□□□□ -0.83
SLIRP-209ENST00000557342 CCDC59Q9P031 241 aaKnown RBP9.86□□□□□ -0.83
SLIRP-209ENST00000557342 ZNF580Q9UK33 172 aa9.86□□□□□ -0.83
SLIRP-209ENST00000557342 TSSC4Q9Y5U2 329 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-209ENST00000557342 FAM25AB3EWG3 89 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 FAM25CB3EWG5 89 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 FAM25GB3EWG6 89 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 TUSC2O75896 110 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 IGF1P05019 195 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 OR5H8P0DN80 308 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 ELK1P19419 428 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 VDAC1P21796 283 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 RPS16P62249 146 aaKnown RBP9.85□□□□□ -0.83
SLIRP-209ENST00000557342 RTL8BQ17RB0 113 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 ZNF329Q86UD4 541 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 OR5AP2Q8NGF4 316 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 RBMXL1Q96E39 390 aaKnown RBP9.85□□□□□ -0.83
SLIRP-209ENST00000557342 HSPB9Q9BQS6 159 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 LINC00527Q9UJ94 153 aa9.85□□□□□ -0.83
SLIRP-209ENST00000557342 MRPS7Q9Y2R9 242 aaKnown RBP9.85□□□□□ -0.83
SLIRP-209ENST00000557342 MEIS3P1A6NDR6 274 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 LINC01548A6NM66 108 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 J3QRK9 145 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 SULT1C2O00338 296 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 IGKV1-16P04430 117 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 FCGR2CP31995 323 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 DUTP33316 252 aaKnown RBP9.84□□□□□ -0.83
SLIRP-209ENST00000557342 LGALS7P47929 136 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 LINC00205P59089 165 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 TAS2R46P59540 309 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 CDK10Q15131 360 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 TCTEX1D4Q5JR98 221 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 ZNF660Q6AZW8 331 aaPredicted RBP9.84□□□□□ -0.83
SLIRP-209ENST00000557342 HIST2H2BDQ6DRA6 164 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 TEX38Q6PEX7 206 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 FAM110DQ8TAY7 271 aaPredicted RBP9.84□□□□□ -0.83
SLIRP-209ENST00000557342 SNAPC3Q92966 411 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 OR51J1Q9H342 316 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 FBXL15Q9H469 300 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 SCPEP1Q9HB40 452 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 ZFP57Q9NU63 452 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 METTL1Q9UBP6 276 aaKnown RBP9.84□□□□□ -0.83
SLIRP-209ENST00000557342 ADAM30Q9UKF2 790 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 ANAPC10Q9UM13 185 aa9.84□□□□□ -0.83
SLIRP-209ENST00000557342 RBMX2Q9Y388 322 aaKnown RBP9.84□□□□□ -0.83
SLIRP-209ENST00000557342 IGHV7-81A0A0B4J1V7 117 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 IGKV1D-13A0A0B4J2D9 117 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 ADARB2-AS1A8MUL3 147 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 TPPPO94811 219 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 FCER2P06734 321 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 IGKV1-13P0DP09 117 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 NAT1P18440 290 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 PSG5Q15238 335 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 MSMO1Q15800 293 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 TMEM177Q53S58 311 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 KHDC1LQ5JSQ8 128 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 C10orf99Q6UWK7 81 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 BVESQ8NE79 360 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 GPX8Q8TED1 209 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 C15orf40Q8WUR7 153 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 GIMAP1Q8WWP7 306 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 DDB2Q92466 427 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 R3HDM4Q96D70 268 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 C5orf30Q96GV9 206 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 HSD17B10Q99714 261 aaKnown RBP9.83□□□□□ -0.84
SLIRP-209ENST00000557342 DCUN1D5Q9BTE7 237 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 EXTL2Q9UBQ6 330 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 PRELID3BQ9Y3B1 194 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 A3GALT2U3KPV4 340 aa9.83□□□□□ -0.84
SLIRP-209ENST00000557342 A0A1W2PRX2 142 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 SHOXO15266 292 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 PPYP01298 95 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 ELANEP08246 267 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 PF4V1P10720 104 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 AADACP22760 399 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 SLC6A1P30531 599 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 FOXE3Q13461 319 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 CXorf66Q5JRM2 361 aaPredicted RBP9.82□□□□□ -0.84
SLIRP-209ENST00000557342 ZNF66Q6ZN08 573 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 KCTD9Q7L273 389 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 SNX29P2Q8IUI4 249 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 ZBTB34Q8NCN2 500 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 OR5H2Q8NGV7 314 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 OSR1Q8TAX0 266 aaPredicted RBP9.82□□□□□ -0.84
SLIRP-209ENST00000557342 BORCS5Q969J3 196 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 HARBI1Q96MB7 349 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 SLIRPQ9GZT3 109 aaKnown RBP9.82□□□□□ -0.84
SLIRP-209ENST00000557342 PARP11Q9NR21 331 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 EHFQ9NZC4 300 aa9.82□□□□□ -0.84
SLIRP-209ENST00000557342 LINC00473A8K010 186 aa9.81□□□□□ -0.84
SLIRP-209ENST00000557342 ATP6V0E1O15342 81 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms