RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 MC5RP33032 325 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 VAMP2P63027 116 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 CDK5Q00535 292 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 IL13RA2Q14627 380 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 FXYD3Q14802 87 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 PLGLAQ15195 96 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 MORN2Q502X0 79 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 LY6G6FQ5SQ64 297 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 GFI1BQ5VTD9 330 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 FAM131AQ6UXB0 335 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 SLC38A6Q8IZM9 456 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 TMEM61Q8N0U2 210 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 AQP11Q8NBQ7 271 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 OR11H2Q8NH07 326 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 TEX47Q8TBZ9 253 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 TLCD1Q96CP7 247 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 ADAT3Q96EY9 351 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-223ENST00000557076 GALNT14Q96FL9 552 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 OPALINQ96PE5 141 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 NR1H4Q96RI1 486 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-223ENST00000557076 FAM103A1Q9BTL3 118 aaKnown RBP3.41□□□□□ -1.86
SCFD1-223ENST00000557076 CSTL1Q9H114 145 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 MAP6D1Q9H9H5 199 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 SAR1AQ9NR31 198 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 GNG12Q9UBI6 72 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 VPS13BQ7Z7G8 4022 aa3.41□□□□□ -1.86
SCFD1-223ENST00000557076 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.86
SCFD1-223ENST00000557076 IGHV3-43A0A0B4J1X8 118 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 TRAV10A0A0B4J240 114 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 A0A0G2JND7 137 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 FAM90A7PA6NKC0 464 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 SAC3D1A6NKF1 404 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 FAM90A23PA8MXZ1 464 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 MAGEB4O15481 346 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-223ENST00000557076 SULT1C4O75897 302 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 IGKV3-20P01619 116 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 C8orf88P0DMB2 117 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 IGHV3-43DP0DP04 118 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 EPHA2P29317 976 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 MAGEA2P43356 314 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 LGALS7P47929 136 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 CXCR4P61073 352 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 RPP30P78346 268 aaKnown RBP3.4□□□□□ -1.87
SCFD1-223ENST00000557076 ATP5G2Q06055 141 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 GINS1Q14691 196 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 PSG5Q15238 335 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 KISS1Q15726 138 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 ODF4Q2M2E3 257 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 SERTAD4-AS1Q5TG53 156 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 HACD2Q6Y1H2 254 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 ZNF833PQ6ZTB9 187 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 ODF3L1Q8IXM7 274 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 SUMF2Q8NBJ7 301 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 UXS1Q8NBZ7 420 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 ADAD2Q8NCV1 583 aaKnown RBP3.4□□□□□ -1.87
SCFD1-223ENST00000557076 BBS1Q8NFJ9 593 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 PXT1Q8NFP0 134 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 OR1L6Q8NGR2 347 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 OR4A5Q8NH83 315 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 UBALD1Q8TB05 177 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 CCDC107Q8WV48 283 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 NUDCD2Q8WVJ2 157 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 THRSPQ92748 146 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 RFT1Q96AA3 541 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 FGGYQ96C11 551 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 ASB9Q96DX5 294 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 SULT4A1Q9BR01 284 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 ABHD14AQ9BUJ0 271 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 MRPL20Q9BYC9 149 aaKnown RBP3.4□□□□□ -1.87
SCFD1-223ENST00000557076 EFCAB1Q9HAE3 211 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 NEK6Q9HC98 313 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 OR2S2Q9NQN1 319 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 ABCD2Q9UBJ2 740 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 RPL36Q9Y3U8 105 aaKnown RBP3.4□□□□□ -1.87
SCFD1-223ENST00000557076 GMPPBQ9Y5P6 360 aa3.4□□□□□ -1.87
SCFD1-223ENST00000557076 TRBV9A0A0B4J1U6 114 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 CCDC182A6NF36 153 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 OR5H14A6NHG9 310 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 FAM223BA6NKX1 122 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 IFITM10A6NMD0 228 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 MPTX1A8MV57 137 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 H3BN98 237 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 ARPC2O15144 300 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 SULT1B1O43704 296 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 SNX3O60493 162 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 RPP14O95059 124 aaKnown RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 OR2C1O95371 312 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 CA2P00918 260 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 IFNA10P01566 189 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 IFNA21P01568 189 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 IFNA17P01571 189 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 HBZP02008 142 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 ISG15P05161 165 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 MRPL3P09001 348 aaKnown RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 OCM2P0CE71 109 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 OCMP0CE72 109 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 UBCP0CG48 685 aaKnown RBP3.39□□□□□ -1.87
SCFD1-223ENST00000557076 CT45A6P0DMU7 189 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 CT45A5P0DMU8 189 aa3.39□□□□□ -1.87
SCFD1-223ENST00000557076 CT45A7P0DMV0 189 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms