RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 A0A075B6Q4 140 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 M0R1X1 148 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 SOX15O60248 233 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 RAMP3O60896 148 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 OR8U9P0C7N5 309 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 RPS16P62249 146 aaKnown RBP17.61■□□□□ 0.41
TMEM260-214ENST00000556975 DGCR2P98153 550 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 ARFRP1Q13795 201 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 AKIRIN2Q53H80 203 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 C9orf66Q5T8R8 295 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 OR1N2Q8NGR9 330 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 FLYWCH2Q96CP2 140 aaKnown RBP17.61■□□□□ 0.41
TMEM260-214ENST00000556975 SDHAF2Q9NX18 166 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 SSR3Q9UNL2 185 aa17.61■□□□□ 0.41
TMEM260-214ENST00000556975 FOXA2Q9Y261 457 aaPredicted RBP17.61■□□□□ 0.41
TMEM260-214ENST00000556975 A0A1W2PN81 502 aa17.6■□□□□ 0.41
TMEM260-214ENST00000556975 DTYMKP23919 212 aa17.6■□□□□ 0.41
TMEM260-214ENST00000556975 CHRNA7P36544 502 aa17.6■□□□□ 0.41
TMEM260-214ENST00000556975 TALDO1P37837 337 aa17.6■□□□□ 0.41
TMEM260-214ENST00000556975 TAGLNQ01995 201 aaKnown RBP17.6■□□□□ 0.41
TMEM260-214ENST00000556975 ECSCRQ19T08 205 aa17.6■□□□□ 0.41
TMEM260-214ENST00000556975 ZNF773Q6PK81 442 aa17.6■□□□□ 0.41
TMEM260-214ENST00000556975 MAFIPQ8WZ33 124 aa17.6■□□□□ 0.41
TMEM260-214ENST00000556975 OR2D2Q9H210 308 aa17.6■□□□□ 0.41
TMEM260-214ENST00000556975 SLC35D1Q9NTN3 355 aa17.6■□□□□ 0.41
TMEM260-214ENST00000556975 SMIM30A4D0T7 59 aa17.59■□□□□ 0.41
TMEM260-214ENST00000556975 OR8U8P0C7N1 319 aa17.59■□□□□ 0.41
TMEM260-214ENST00000556975 LGALS7P47929 136 aa17.59■□□□□ 0.41
TMEM260-214ENST00000556975 ZNF616Q08AN1 781 aa17.59■□□□□ 0.41
TMEM260-214ENST00000556975 CDNFQ49AH0 187 aa17.59■□□□□ 0.41
TMEM260-214ENST00000556975 ASPHD1Q5U4P2 390 aa17.59■□□□□ 0.41
TMEM260-214ENST00000556975 PYHIN1Q6K0P9 492 aa17.59■□□□□ 0.41
TMEM260-214ENST00000556975 PPP1R27Q86WC6 154 aa17.59■□□□□ 0.41
TMEM260-214ENST00000556975 CLCC1Q96S66 551 aa17.59■□□□□ 0.41
TMEM260-214ENST00000556975 SCOCQ9UIL1 159 aa17.59■□□□□ 0.41
TMEM260-214ENST00000556975 CA2P00918 260 aa17.58■□□□□ 0.4
TMEM260-214ENST00000556975 LUMP51884 338 aaPredicted RBP17.58■□□□□ 0.4
TMEM260-214ENST00000556975 GNB1P62873 340 aa17.58■□□□□ 0.4
TMEM260-214ENST00000556975 DCTN2Q13561 401 aaKnown RBP17.58■□□□□ 0.4
TMEM260-214ENST00000556975 H1FOOQ8IZA3 346 aaPredicted RBP17.58■□□□□ 0.4
TMEM260-214ENST00000556975 ELF5Q9UKW6 265 aaPredicted RBP17.58■□□□□ 0.4
TMEM260-214ENST00000556975 IGKV1D-8A0A087WSZ0 117 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 SEC14L6B5MCN3 397 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 SCGNO76038 276 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 IGLV2-23P01705 113 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 SNRPBP14678 240 aaKnown RBP17.57■□□□□ 0.4
TMEM260-214ENST00000556975 ACTBL2Q562R1 376 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 HACD4Q5VWC8 232 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 UNQ5815/PRO19632Q6UWF5 114 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 LFNGQ8NES3 379 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 ABHD5Q8WTS1 349 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 C5orf30Q96GV9 206 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 OR5B12Q96R08 314 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 GINS4Q9BRT9 223 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 FAM103A1Q9BTL3 118 aaKnown RBP17.57■□□□□ 0.4
TMEM260-214ENST00000556975 OR51E2Q9H255 320 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 DCSTAMPQ9H295 470 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 DAPK2Q9UIK4 370 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 A3GALT2U3KPV4 340 aa17.57■□□□□ 0.4
TMEM260-214ENST00000556975 SLC25A17O43808 307 aa17.56■□□□□ 0.4
TMEM260-214ENST00000556975 CRYGBP07316 175 aa17.56■□□□□ 0.4
TMEM260-214ENST00000556975 PITPNAQ00169 270 aa17.56■□□□□ 0.4
TMEM260-214ENST00000556975 TMEM177Q53S58 311 aa17.56■□□□□ 0.4
TMEM260-214ENST00000556975 SFXN4Q6P4A7 337 aa17.56■□□□□ 0.4
TMEM260-214ENST00000556975 TPSG1Q9NRR2 321 aa17.56■□□□□ 0.4
TMEM260-214ENST00000556975 RRP15Q9Y3B9 282 aaKnown RBP17.56■□□□□ 0.4
TMEM260-214ENST00000556975 RBM7Q9Y580 266 aaKnown RBP17.56■□□□□ 0.4
TMEM260-214ENST00000556975 DNAH9Q9NYC9 4486 aa17.56■□□□□ 0.4
TMEM260-214ENST00000556975 KMT2CQ8NEZ4 4911 aaKnown RBP17.55■□□□□ 0.4
TMEM260-214ENST00000556975 RRASP10301 218 aa17.55■□□□□ 0.4
TMEM260-214ENST00000556975 SDC2P34741 201 aa17.55■□□□□ 0.4
TMEM260-214ENST00000556975 INSL3P51460 131 aa17.55■□□□□ 0.4
TMEM260-214ENST00000556975 SCAND1P57086 179 aa17.55■□□□□ 0.4
TMEM260-214ENST00000556975 FXYD3Q14802 87 aa17.55■□□□□ 0.4
TMEM260-214ENST00000556975 DDB2Q92466 427 aa17.55■□□□□ 0.4
TMEM260-214ENST00000556975 ARPC1AQ92747 370 aa17.55■□□□□ 0.4
TMEM260-214ENST00000556975 ADTRPQ96IZ2 230 aa17.55■□□□□ 0.4
TMEM260-214ENST00000556975 SLA2Q9H6Q3 261 aa17.55■□□□□ 0.4
TMEM260-214ENST00000556975 COL7A1Q02388 2944 aa17.54■□□□□ 0.4
TMEM260-214ENST00000556975 TENM3Q9P273 2699 aa17.54■□□□□ 0.4
TMEM260-214ENST00000556975 ARPC1BO15143 372 aaKnown RBP17.54■□□□□ 0.4
TMEM260-214ENST00000556975 LGALS1P09382 135 aaKnown RBP17.54■□□□□ 0.4
TMEM260-214ENST00000556975 CTXN2P0C2S0 81 aa17.54■□□□□ 0.4
TMEM260-214ENST00000556975 CD40LGP29965 261 aa17.54■□□□□ 0.4
TMEM260-214ENST00000556975 DUTP33316 252 aaKnown RBP17.54■□□□□ 0.4
TMEM260-214ENST00000556975 SSBP2P81877 361 aaPredicted RBP17.54■□□□□ 0.4
TMEM260-214ENST00000556975 ZNF260Q3ZCT1 412 aa17.54■□□□□ 0.4
TMEM260-214ENST00000556975 BVESQ8NE79 360 aa17.54■□□□□ 0.4
TMEM260-214ENST00000556975 CASTOR1Q8WTX7 329 aa17.54■□□□□ 0.4
TMEM260-214ENST00000556975 B9D2Q9BPU9 175 aa17.54■□□□□ 0.4
TMEM260-214ENST00000556975 ST6GALNAC5Q9BVH7 336 aa17.54■□□□□ 0.4
TMEM260-214ENST00000556975 CBX3Q13185 183 aa17.53■□□□□ 0.4
TMEM260-214ENST00000556975 KCTD21Q4G0X4 260 aa17.53■□□□□ 0.4
TMEM260-214ENST00000556975 LGALS14Q8TCE9 139 aa17.53■□□□□ 0.4
TMEM260-214ENST00000556975 DCUN1D4Q92564 292 aa17.53■□□□□ 0.4
TMEM260-214ENST00000556975 RHOVQ96L33 236 aa17.53■□□□□ 0.4
TMEM260-214ENST00000556975 HARBI1Q96MB7 349 aa17.53■□□□□ 0.4
TMEM260-214ENST00000556975 ALX4Q9H161 411 aaPredicted RBP17.53■□□□□ 0.4
TMEM260-214ENST00000556975 SRRM4A7MD48 611 aaKnown RBP17.52■□□□□ 0.4
TMEM260-214ENST00000556975 LINC01619G3V211 115 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms