RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 PALMDQ9NP74 551 aa4.3□□□□□ -1.72
ATXN3-244ENST00000556898 OPN4Q9UHM6 478 aa4.3□□□□□ -1.72
ATXN3-244ENST00000556898 ZNF107Q9UII5 783 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-244ENST00000556898 KCNS2Q9ULS6 477 aa4.3□□□□□ -1.72
ATXN3-244ENST00000556898 PSG11Q9UQ72 335 aa4.3□□□□□ -1.72
ATXN3-244ENST00000556898 INSIG2Q9Y5U4 225 aa4.3□□□□□ -1.72
ATXN3-244ENST00000556898 SESN1Q9Y6P5 492 aa4.3□□□□□ -1.72
ATXN3-244ENST00000556898 ABCA1O95477 2261 aa4.3□□□□□ -1.72
ATXN3-244ENST00000556898 CUBNO60494 3623 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 IGHV2-26A0A0B4J1V2 119 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 A0A0B4J293 547 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 CENPXA8MT69 81 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 RNASEK-C17orf49H0YIS7 233 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 TCF21O43680 179 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 YPEL1O60688 119 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 NDUFB6O95139 128 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 DIRAS3O95661 229 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 TGFAP01135 160 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 TCRBP04435 133 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 RLN1P04808 185 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 CTXN2P0C2S0 81 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 IGHV4-38-2P0DP08 117 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 TBPP20226 339 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 GNRHRP30968 328 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 FAUP35544 74 aaKnown RBP4.29□□□□□ -1.72
ATXN3-244ENST00000556898 REG1BP48304 166 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 UBE2MP61081 183 aaKnown RBP4.29□□□□□ -1.72
ATXN3-244ENST00000556898 HERV-K104P61576 105 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 RPL30P62888 115 aaKnown RBP4.29□□□□□ -1.72
ATXN3-244ENST00000556898 HTD2P86397 168 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 PAX8Q06710 450 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 FAM120AOSQ5T036 256 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 MZT2BQ6NZ67 158 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 FAHD2BQ6P2I3 314 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-244ENST00000556898 TRAT1Q6PIZ9 186 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 GLDNQ6ZMI3 551 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-244ENST00000556898 ZNF818PQ6ZRF7 136 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 IL17RELQ6ZVW7 336 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 TMED4Q7Z7H5 227 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 LHFPL4Q7Z7J7 247 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 LYG1Q8N1E2 194 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 DYNAPQ8N1N2 210 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 ABHD12Q8N2K0 398 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 ARRDC1Q8N5I2 433 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 DRAXINQ8NBI3 349 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-244ENST00000556898 OR52B4Q8NGK2 314 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 TERB2Q8NHR7 220 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 CHPT1Q8WUD6 406 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 TMEM186Q96B77 213 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 FAHD2AQ96GK7 314 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 YPEL2Q96QA6 119 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 PRRT1Q99946 306 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 SEC22CQ9BRL7 303 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 RTBDNQ9BSG5 229 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-244ENST00000556898 TOLLIPQ9H0E2 274 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 C20orf85Q9H1P6 137 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 OR2D2Q9H210 308 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 IFI27L2Q9H2X8 130 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 C5orf66Q9H5L9 145 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 LINC00574Q9H8X3 128 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 HIF1ANQ9NWT6 349 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 SDHAF2Q9NX18 166 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 SLC2A8Q9NY64 477 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 ZNF221Q9UK13 617 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 JPT1Q9UK76 154 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 MGAT4AQ9UM21 535 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 GPR132Q9UNW8 380 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 OR2W1Q9Y3N9 320 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 ZANQ9Y493 2812 aa4.29□□□□□ -1.72
ATXN3-244ENST00000556898 ARHGAP32A7KAX9 2087 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 A0A087X0M5 115 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 SAA2-SAA4A0A096LPE2 208 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 CENPVL3A0A0U1RRI6 287 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 A0A1B0GX30 115 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 B4DSR2 109 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 INMT-MINDY4F8WBC2 141 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 J3QR06 171 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 M0R1W7 72 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 TOR1AO14656 332 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 PTTG1O95997 202 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 ARG1P05089 322 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 CTSDP07339 412 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-244ENST00000556898 SAA2P0DJI9 122 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-244ENST00000556898 AKR1C4P17516 323 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 PRTN3P24158 256 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 LUMP51884 338 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-244ENST00000556898 EIF4EBP1Q13541 118 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-244ENST00000556898 SLC9A3R2Q15599 337 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 TRIM16LQ309B1 348 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 SP6Q3SY56 376 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 Q3ZCU0 254 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 PDLIM3Q53GG5 364 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-244ENST00000556898 C19orf54Q5BKX5 351 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 OR2B11Q5JQS5 317 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 KLF17Q5JT82 389 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-244ENST00000556898 TOR2AQ5JU69 321 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 DCAF12L2Q5VW00 463 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 LIN54Q6MZP7 749 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 BRD3OSQ6XYD6 125 aa4.28□□□□□ -1.72
ATXN3-244ENST00000556898 Q6ZNX1 250 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms