RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 REC114Q7Z4M0 266 aa17.7■□□□□ 0.42
PABPN1-207ENST00000556821 ZNF695Q8IW36 515 aa17.7■□□□□ 0.42
PABPN1-207ENST00000556821 FUNDC2Q9BWH2 189 aa17.7■□□□□ 0.42
PABPN1-207ENST00000556821 SLC35D1Q9NTN3 355 aa17.7■□□□□ 0.42
PABPN1-207ENST00000556821 WSB1Q9Y6I7 421 aa17.7■□□□□ 0.42
PABPN1-207ENST00000556821 A0A0A6YYH2 397 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 A6NJ64 397 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 NUDT19A8MXV4 375 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 APOA2P02652 100 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 OR5H8P0DN80 308 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 IGLL1P15814 213 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 SLC6A1P30531 599 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 NCS1P62166 190 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 PSG5Q15238 335 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 CROCCP3Q8IVE0 287 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 OR13F1Q8NGS4 319 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 ANXA10Q9UJ72 324 aa17.69■□□□□ 0.42
PABPN1-207ENST00000556821 PTHLHP12272 177 aa17.68■□□□□ 0.42
PABPN1-207ENST00000556821 CRIP2P52943 208 aaPredicted RBP17.68■□□□□ 0.42
PABPN1-207ENST00000556821 CX3CL1P78423 397 aa17.68■□□□□ 0.42
PABPN1-207ENST00000556821 VAX1Q5SQQ9 334 aa17.68■□□□□ 0.42
PABPN1-207ENST00000556821 CNIH2Q6PI25 160 aa17.68■□□□□ 0.42
PABPN1-207ENST00000556821 MRPL41Q8IXM3 137 aaKnown RBP17.68■□□□□ 0.42
PABPN1-207ENST00000556821 MYOZ3Q8TDC0 251 aa17.68■□□□□ 0.42
PABPN1-207ENST00000556821 DDB2Q92466 427 aa17.68■□□□□ 0.42
PABPN1-207ENST00000556821 P2RX4Q99571 388 aa17.68■□□□□ 0.42
PABPN1-207ENST00000556821 AUNIPQ9H7T9 357 aa17.68■□□□□ 0.42
PABPN1-207ENST00000556821 TPSG1Q9NRR2 321 aa17.68■□□□□ 0.42
PABPN1-207ENST00000556821 METTL1Q9UBP6 276 aaKnown RBP17.68■□□□□ 0.42
PABPN1-207ENST00000556821 TRAV41A0A0B4J266 112 aa17.67■□□□□ 0.42
PABPN1-207ENST00000556821 SPDEFO95238 335 aa17.67■□□□□ 0.42
PABPN1-207ENST00000556821 IGLV1-40P01703 118 aa17.67■□□□□ 0.42
PABPN1-207ENST00000556821 IGLV2-23P01705 113 aa17.67■□□□□ 0.42
PABPN1-207ENST00000556821 CTXN2P0C2S0 81 aa17.67■□□□□ 0.42
PABPN1-207ENST00000556821 NFYAP23511 347 aaPredicted RBP17.67■□□□□ 0.42
PABPN1-207ENST00000556821 RPS16P62249 146 aaKnown RBP17.67■□□□□ 0.42
PABPN1-207ENST00000556821 PLGLAQ15195 96 aa17.67■□□□□ 0.42
PABPN1-207ENST00000556821 ZNF660Q6AZW8 331 aaPredicted RBP17.67■□□□□ 0.42
PABPN1-207ENST00000556821 GVQW1Q8N7I0 195 aa17.67■□□□□ 0.42
PABPN1-207ENST00000556821 DUX3Q96PT4 197 aa17.67■□□□□ 0.42
PABPN1-207ENST00000556821 TSNAXQ99598 290 aaKnown RBP17.67■□□□□ 0.42
PABPN1-207ENST00000556821 OR2W1Q9Y3N9 320 aa17.67■□□□□ 0.42
PABPN1-207ENST00000556821 RBM7Q9Y580 266 aaKnown RBP17.67■□□□□ 0.42
PABPN1-207ENST00000556821 IGKV1D-13A0A0B4J2D9 117 aa17.66■□□□□ 0.42
PABPN1-207ENST00000556821 IGKV1-13P0DP09 117 aa17.66■□□□□ 0.42
PABPN1-207ENST00000556821 EGR2P11161 476 aaPredicted RBP17.66■□□□□ 0.42
PABPN1-207ENST00000556821 DUTP33316 252 aaKnown RBP17.66■□□□□ 0.42
PABPN1-207ENST00000556821 CDX1P47902 265 aaPredicted RBP17.66■□□□□ 0.42
PABPN1-207ENST00000556821 DEFB136Q30KP8 78 aa17.66■□□□□ 0.42
PABPN1-207ENST00000556821 MINDY2Q8NBR6 621 aa17.66■□□□□ 0.42
PABPN1-207ENST00000556821 SLC25A46Q96AG3 418 aa17.66■□□□□ 0.42
PABPN1-207ENST00000556821 FLYWCH2Q96CP2 140 aaKnown RBP17.66■□□□□ 0.42
PABPN1-207ENST00000556821 RAX2Q96IS3 184 aa17.66■□□□□ 0.42
PABPN1-207ENST00000556821 KLK15Q9H2R5 256 aa17.66■□□□□ 0.42
PABPN1-207ENST00000556821 DIABLOQ9NR28 239 aa17.66■□□□□ 0.42
PABPN1-207ENST00000556821 LINC00473A8K010 186 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 J3QRK9 145 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 SLC25A17O43808 307 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 SOX15O60248 233 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 CA2P00918 260 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 HLA-DQB1P01920 261 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 MYCNOSP40205 109 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 VBP1P61758 197 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 SSBP2P81877 361 aaPredicted RBP17.65■□□□□ 0.42
PABPN1-207ENST00000556821 KIAA0141Q14154 515 aaPredicted RBP17.65■□□□□ 0.42
PABPN1-207ENST00000556821 ECSCRQ19T08 205 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 UBE2NLQ5JXB2 153 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 BVESQ8NE79 360 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 BEST4Q8NFU0 473 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 CLCC1Q96S66 551 aa17.65■□□□□ 0.42
PABPN1-207ENST00000556821 XRCC3O43542 346 aa17.64■□□□□ 0.41
PABPN1-207ENST00000556821 TUSC2O75896 110 aa17.64■□□□□ 0.41
PABPN1-207ENST00000556821 IGLV2-14P01704 120 aa17.64■□□□□ 0.41
PABPN1-207ENST00000556821 TMEM177Q53S58 311 aa17.64■□□□□ 0.41
PABPN1-207ENST00000556821 HOGA1Q86XE5 327 aa17.64■□□□□ 0.41
PABPN1-207ENST00000556821 ZNF645Q8N7E2 425 aa17.64■□□□□ 0.41
PABPN1-207ENST00000556821 SAMD12Q8N8I0 201 aa17.64■□□□□ 0.41
PABPN1-207ENST00000556821 RCC1LQ96I51 464 aaKnown RBP17.64■□□□□ 0.41
PABPN1-207ENST00000556821 FAM103A1Q9BTL3 118 aaKnown RBP17.64■□□□□ 0.41
PABPN1-207ENST00000556821 NUBP2Q9Y5Y2 271 aa17.64■□□□□ 0.41
PABPN1-207ENST00000556821 CRYGBP07316 175 aa17.63■□□□□ 0.41
PABPN1-207ENST00000556821 LUMP51884 338 aaPredicted RBP17.63■□□□□ 0.41
PABPN1-207ENST00000556821 FOXB2Q5VYV0 432 aa17.63■□□□□ 0.41
PABPN1-207ENST00000556821 SNAPC3Q92966 411 aa17.63■□□□□ 0.41
PABPN1-207ENST00000556821 HARBI1Q96MB7 349 aa17.63■□□□□ 0.41
PABPN1-207ENST00000556821 NAA50Q9GZZ1 169 aaKnown RBP17.63■□□□□ 0.41
PABPN1-207ENST00000556821 A0A1W2PN81 502 aa17.62■□□□□ 0.41
PABPN1-207ENST00000556821 CCL24O00175 119 aa17.62■□□□□ 0.41
PABPN1-207ENST00000556821 ARPC1BO15143 372 aaKnown RBP17.62■□□□□ 0.41
PABPN1-207ENST00000556821 FCER2P06734 321 aa17.62■□□□□ 0.41
PABPN1-207ENST00000556821 CHRNA7P36544 502 aa17.62■□□□□ 0.41
PABPN1-207ENST00000556821 TAGLNQ01995 201 aaKnown RBP17.62■□□□□ 0.41
PABPN1-207ENST00000556821 RTL8BQ17RB0 113 aa17.62■□□□□ 0.41
PABPN1-207ENST00000556821 ZNF562Q6V9R5 426 aa17.62■□□□□ 0.41
PABPN1-207ENST00000556821 ZNF491Q8N8L2 437 aa17.62■□□□□ 0.41
PABPN1-207ENST00000556821 MRAPQ8TCY5 172 aa17.62■□□□□ 0.41
PABPN1-207ENST00000556821 C4orf3Q8WVX3 66 aa17.62■□□□□ 0.41
PABPN1-207ENST00000556821 KCTD12Q96CX2 325 aaKnown RBP17.62■□□□□ 0.41
PABPN1-207ENST00000556821 S100A16Q96FQ6 103 aaKnown RBP17.62■□□□□ 0.41
PABPN1-207ENST00000556821 ADTRPQ96IZ2 230 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms