RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 DUTP33316 252 aaKnown RBP8.37□□□□□ -1.07
TMEM260-211ENST00000556648 AKR1C3P42330 323 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 SELENOVP59797 346 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 HNF4GQ14541 408 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 ZNF66Q6ZN08 573 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 CLRN3Q8NCR9 226 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 PPP1R35Q8TAP8 253 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 NEUROG1Q92886 237 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 GNPNAT1Q96EK6 184 aaPredicted RBP8.37□□□□□ -1.07
TMEM260-211ENST00000556648 SDSLQ96GA7 329 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 HSD17B10Q99714 261 aaKnown RBP8.37□□□□□ -1.07
TMEM260-211ENST00000556648 QTRT1Q9BXR0 403 aaKnown RBP8.37□□□□□ -1.07
TMEM260-211ENST00000556648 COA4Q9NYJ1 87 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 TANC2Q9HCD6 1990 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 ACACAQ13085 2346 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 DSCAML1Q8TD84 2053 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 UBE2L5PA0A1B0GUS4 154 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 RAB29O14966 203 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 YPEL1O60688 119 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 SNAPINO95295 136 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 IFNA5P01569 189 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 GZMHP20718 246 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 PTAFRP25105 342 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 ERVFRD-1P60508 538 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 SLC38A11Q08AI6 406 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 PEA15Q15121 130 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 AKR1C8PQ5T2L2 129 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 SP5Q6BEB4 398 aaPredicted RBP8.37□□□□□ -1.07
TMEM260-211ENST00000556648 DHRS7BQ6IAN0 325 aaPredicted RBP8.37□□□□□ -1.07
TMEM260-211ENST00000556648 SLC25A24Q6NUK1 477 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 TMEM14EPQ6UXP3 125 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 SSX9Q7RTT3 188 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 SSX7Q7RTT5 188 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 H2BFWTQ7Z2G1 175 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 VKORC1L1Q8N0U8 176 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 LILRB2Q8N423 598 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 ZNF561Q8N587 486 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 COMMD1Q8N668 190 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 R3HDM4Q96D70 268 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 WFIKKN1Q96NZ8 548 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 YPEL2Q96QA6 119 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 ZNRD1Q9P1U0 126 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 RAXQ9Y2V3 346 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 ICE1Q9Y2F5 2266 aa8.37□□□□□ -1.07
TMEM260-211ENST00000556648 MARCH11A6NNE9 402 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 UMAD1C9J7I0 102 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 FAM90A26D6RGX4 464 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 PPIHO43447 177 aaKnown RBP8.36□□□□□ -1.07
TMEM260-211ENST00000556648 FCN3O75636 299 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 H2AFB1P0C5Y9 115 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 OR13C7P0DN81 318 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 TNFSF4P23510 183 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 NHLH1Q02575 133 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 CT45A1Q5HYN5 189 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 CT45A3Q8NHU0 189 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 EDARADDQ8WWZ3 215 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 AIFM2Q9BRQ8 373 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.36□□□□□ -1.07
TMEM260-211ENST00000556648 GFOD1Q9NXC2 390 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 MSRB2Q9Y3D2 182 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 PLCE1Q9P212 2302 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 GFRA3O60609 400 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 GNG10P50151 68 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 ELLP55199 621 aaPredicted RBP8.36□□□□□ -1.07
TMEM260-211ENST00000556648 ZNF726P1Q15940 193 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 HAGHQ16775 308 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 LRRC75BQ2VPJ9 315 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 PRAMEF5Q5TYX0 476 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 ZNF788Q6ZQV5 615 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 DMRTC2Q8IXT2 367 aaPredicted RBP8.36□□□□□ -1.07
TMEM260-211ENST00000556648 SCGB1C1Q8TD33 95 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 C20orf24Q9BUV8 137 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 OR6C3Q9NZP0 311 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 KPTNQ9Y664 436 aa8.36□□□□□ -1.07
TMEM260-211ENST00000556648 SAA2-SAA4A0A096LPE2 208 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 TRAV3A0A0B4J244 114 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 KBTBD11-OT1A0A1B0GTJ5 212 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 PMS2P5A8MQ11 134 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 C17orf100A8MU93 164 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 FBP1P09467 338 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 SAA2P0DJI9 122 aaPredicted RBP8.35□□□□□ -1.07
TMEM260-211ENST00000556648 SMUG1Q53HV7 270 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 TEX36Q5VZQ5 186 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 DTD1Q8TEA8 209 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 SFT2D1Q8WV19 159 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 WDR61Q9GZS3 305 aaKnown RBP8.35□□□□□ -1.07
TMEM260-211ENST00000556648 ZNF665Q9H7R5 613 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 NBEAQ8NFP9 2946 aa8.35□□□□□ -1.07
TMEM260-211ENST00000556648 TRGV8A0A0C4DH27 118 aa8.34□□□□□ -1.07
TMEM260-211ENST00000556648 RBFOX3A6NFN3 312 aa8.34□□□□□ -1.07
TMEM260-211ENST00000556648 CEBPZOSA8MTT3 80 aa8.34□□□□□ -1.07
TMEM260-211ENST00000556648 SHISA9B4DS77 424 aa8.34□□□□□ -1.07
TMEM260-211ENST00000556648 RBMXL2O75526 392 aaKnown RBP8.34□□□□□ -1.07
TMEM260-211ENST00000556648 HBG1P69891 147 aa8.34□□□□□ -1.07
TMEM260-211ENST00000556648 HBG2P69892 147 aa8.34□□□□□ -1.07
TMEM260-211ENST00000556648 TLE1Q04724 770 aa8.34□□□□□ -1.07
TMEM260-211ENST00000556648 TFF3Q07654 80 aa8.34□□□□□ -1.07
TMEM260-211ENST00000556648 ICAM4Q14773 271 aa8.34□□□□□ -1.07
TMEM260-211ENST00000556648 HFEQ30201 348 aa8.34□□□□□ -1.07
TMEM260-211ENST00000556648 AWAT1Q58HT5 328 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms