RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 BVESQ8NE79 360 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 NPBQ8NG41 125 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 FAM110DQ8TAY7 271 aaPredicted RBP13.5□□□□□ -0.25
PSEN1-217ENST00000556533 WIPF2Q8TF74 440 aaPredicted RBP13.5□□□□□ -0.25
PSEN1-217ENST00000556533 SECTM1Q8WVN6 248 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 FLYWCH2Q96CP2 140 aaKnown RBP13.5□□□□□ -0.25
PSEN1-217ENST00000556533 CLCC1Q96S66 551 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 EHFQ9NZC4 300 aa13.5□□□□□ -0.25
PSEN1-217ENST00000556533 AP4M1O00189 453 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 KCNAB3O43448 404 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 TSPAN15O95858 294 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 HLA-DMAP28067 261 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 RFX2P48378 723 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 FXYD4P59646 89 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 CBX3Q13185 183 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 RTL8BQ17RB0 113 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 C2orf68Q2NKX9 166 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 KHDC1LQ5JSQ8 128 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 TREML4Q6UXN2 200 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 PDPNQ86YL7 162 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 LAX1Q8IWV1 398 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 OR4X2Q8NGF9 303 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 OR5H2Q8NGV7 314 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 GPX8Q8TED1 209 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 CHPT1Q8WUD6 406 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 TSNAXQ99598 290 aaKnown RBP13.49□□□□□ -0.25
PSEN1-217ENST00000556533 MIXL1Q9H2W2 232 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 SCPEP1Q9HB40 452 aa13.49□□□□□ -0.25
PSEN1-217ENST00000556533 CCDC59Q9P031 241 aaKnown RBP13.49□□□□□ -0.25
PSEN1-217ENST00000556533 RRHO14718 337 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 SLC22A5O76082 557 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 DUTP33316 252 aaKnown RBP13.48□□□□□ -0.25
PSEN1-217ENST00000556533 TAS2R46P59540 309 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 SLC35B1P78383 322 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 PSG5Q15238 335 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 TCTEX1D4Q5JR98 221 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 LYSMD2Q8IV50 215 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 STPG2Q8N412 459 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 ADTRPQ96IZ2 230 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 RNF5Q99942 180 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 DCUN1D5Q9BTE7 237 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 C6orf62Q9GZU0 229 aaPredicted RBP13.48□□□□□ -0.25
PSEN1-217ENST00000556533 SLC5A7Q9GZV3 580 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 PARP11Q9NR21 331 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 CCL28Q9NRJ3 127 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 METTL1Q9UBP6 276 aaKnown RBP13.48□□□□□ -0.25
PSEN1-217ENST00000556533 ADAM30Q9UKF2 790 aa13.48□□□□□ -0.25
PSEN1-217ENST00000556533 RBMX2Q9Y388 322 aaKnown RBP13.48□□□□□ -0.25
PSEN1-217ENST00000556533 LINC00473A8K010 186 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 FCN1O00602 326 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 SHOXO15266 292 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 NDUFA3O95167 84 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 PPYP01298 95 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 NAT1P18440 290 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 HERV-K104P61576 105 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 TAGLNQ01995 201 aaKnown RBP13.47□□□□□ -0.25
PSEN1-217ENST00000556533 OR2B11Q5JQS5 317 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 ABHD5Q8WTS1 349 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 GIMAP1Q8WWP7 306 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 TAS2R8Q9NYW2 309 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 ANAPC10Q9UM13 185 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 WSB1Q9Y6I7 421 aa13.47□□□□□ -0.25
PSEN1-217ENST00000556533 TNFSF12O43508 249 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 SLC25A17O43808 307 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 FCGR3BO75015 233 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 CRYZL1O95825 349 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 HLA-DRB1P01911 266 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 RRASP10301 218 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 VDAC1P21796 283 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 RCVRNP35243 200 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 HRH1P35367 487 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 CD83Q01151 205 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 OVCH2Q7RTZ1 564 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 TMEM17Q86X19 198 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 NDUFA11Q86Y39 141 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 MCFD2Q8NI22 146 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 TCTEX1D2Q8WW35 142 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 DIRAS2Q96HU8 199 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 HARBI1Q96MB7 349 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 ABHD1Q96SE0 405 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 GPHA2Q96T91 129 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 ZNF2Q9BSG1 426 aaPredicted RBP13.46□□□□□ -0.25
PSEN1-217ENST00000556533 GON7Q9BXV9 100 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 OR51J1Q9H342 316 aa13.46□□□□□ -0.25
PSEN1-217ENST00000556533 IGHV7-81A0A0B4J1V7 117 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 SULT1C2O00338 296 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 IGLV2-14P01704 120 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 OPN1MWP04001 364 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 OPN1MW2P0DN77 364 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 OPN1MW3P0DN78 364 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 TSPAN5P62079 268 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 RPL30P62888 115 aaKnown RBP13.45□□□□□ -0.26
PSEN1-217ENST00000556533 DYRK1AQ13627 763 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 KCTD9Q7L273 389 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 OR52I2Q8NH67 350 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 FCAMRQ8WWV6 532 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 DDB2Q92466 427 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 R3HDM4Q96D70 268 aa13.45□□□□□ -0.26
PSEN1-217ENST00000556533 SLIRPQ9GZT3 109 aaKnown RBP13.45□□□□□ -0.26
PSEN1-217ENST00000556533 KLK11Q9UBX7 282 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms