RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 TRAV18A0A075B6X5 111 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 TRAV41A0A0B4J266 112 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 IGKV1D-13A0A0B4J2D9 117 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 SRRM4A7MD48 611 aaKnown RBP6.32□□□□□ -1.4
VTI1B-206ENST00000556461 RRP9O43818 475 aaKnown RBP6.32□□□□□ -1.4
VTI1B-206ENST00000556461 AIREO43918 545 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 RBBP9O75884 186 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 DIRAS3O95661 229 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 CA2P00918 260 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 IGLV1-40P01703 118 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 IGLV2-14P01704 120 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 IGLV2-23P01705 113 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 FCER2P06734 321 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 ELANEP08246 267 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 IGKV1-13P0DP09 117 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 HOXD3P31249 432 aaPredicted RBP6.32□□□□□ -1.4
VTI1B-206ENST00000556461 MC5RP33032 325 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 GNG2P59768 71 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 PJVKQ0ZLH3 352 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 ECSCRQ19T08 205 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 MRGPRG-AS1Q2M3A8 158 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 CXorf66Q5JRM2 361 aaPredicted RBP6.32□□□□□ -1.4
VTI1B-206ENST00000556461 GVQW1Q8N7I0 195 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.32□□□□□ -1.4
VTI1B-206ENST00000556461 BVESQ8NE79 360 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 MYOZ3Q8TDC0 251 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 GINS4Q9BRT9 223 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 SLC35D1Q9NTN3 355 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 AURKAIP1Q9NWT8 199 aaPredicted RBP6.32□□□□□ -1.4
VTI1B-206ENST00000556461 KIAA1456Q9P272 454 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 METTL1Q9UBP6 276 aaKnown RBP6.32□□□□□ -1.4
VTI1B-206ENST00000556461 ETV7Q9Y603 341 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 A3GALT2U3KPV4 340 aa6.32□□□□□ -1.4
VTI1B-206ENST00000556461 MEIS3P1A6NDR6 274 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 LINC00473A8K010 186 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 CCL24O00175 119 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 ARPC1BO15143 372 aaKnown RBP6.31□□□□□ -1.4
VTI1B-206ENST00000556461 SLC25A17O43808 307 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 CRYGBP07316 175 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 DUTP33316 252 aaKnown RBP6.31□□□□□ -1.4
VTI1B-206ENST00000556461 MYCNOSP40205 109 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 CDX1P47902 265 aaPredicted RBP6.31□□□□□ -1.4
VTI1B-206ENST00000556461 CRIP2P52943 208 aaPredicted RBP6.31□□□□□ -1.4
VTI1B-206ENST00000556461 SCAND1P57086 179 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 NCS1P62166 190 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 RPS16P62249 146 aaKnown RBP6.31□□□□□ -1.4
VTI1B-206ENST00000556461 GNB1P62873 340 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 RPL30P62888 115 aaKnown RBP6.31□□□□□ -1.4
VTI1B-206ENST00000556461 ARL6IP1Q15041 203 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 PLGLAQ15195 96 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 ASPHD1Q5U4P2 390 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 ZNF660Q6AZW8 331 aaPredicted RBP6.31□□□□□ -1.4
VTI1B-206ENST00000556461 PDPNQ86YL7 162 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 ZNF491Q8N8L2 437 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 MINDY2Q8NBR6 621 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 DDB2Q92466 427 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 FLYWCH2Q96CP2 140 aaKnown RBP6.31□□□□□ -1.4
VTI1B-206ENST00000556461 OR5B12Q96R08 314 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 RNF5Q99942 180 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 FUNDC2Q9BWH2 189 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 GON7Q9BXV9 100 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 NAA50Q9GZZ1 169 aaKnown RBP6.31□□□□□ -1.4
VTI1B-206ENST00000556461 ALX4Q9H161 411 aaPredicted RBP6.31□□□□□ -1.4
VTI1B-206ENST00000556461 DCSTAMPQ9H295 470 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 AUNIPQ9H7T9 357 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 NECAP2Q9NVZ3 263 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 ANXA10Q9UJ72 324 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 SPATA2Q9UM82 520 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 NUBP2Q9Y5Y2 271 aa6.31□□□□□ -1.4
VTI1B-206ENST00000556461 A0A1W2PN81 502 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 WI2-2373I1.2A0A1W2PRP0 233 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 TUSC2O75896 110 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 SCGNO76038 276 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 SPDEFO95238 335 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 HLA-DQB1P01920 261 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 APOA2P02652 100 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 OR5H8P0DN80 308 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 CHRNA7P36544 502 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 RAB9AP51151 201 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 RAB25P57735 213 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 VBP1P61758 197 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 PITPNAQ00169 270 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 EIF4EBP1Q13541 118 aaPredicted RBP6.3□□□□□ -1.4
VTI1B-206ENST00000556461 TIMM50Q3ZCQ8 353 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 TMEM177Q53S58 311 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 CNIH2Q6PI25 160 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 PPP1R27Q86WC6 154 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 HOGA1Q86XE5 327 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 LFNGQ8NES3 379 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 OR13F1Q8NGS4 319 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 ABHD5Q8WTS1 349 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 SNAPC3Q92966 411 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 RCC1LQ96I51 464 aaKnown RBP6.3□□□□□ -1.4
VTI1B-206ENST00000556461 GPHA2Q96T91 129 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 TSNAXQ99598 290 aaKnown RBP6.3□□□□□ -1.4
VTI1B-206ENST00000556461 VCX3AQ9NNX9 186 aa6.3□□□□□ -1.4
VTI1B-206ENST00000556461 RBM7Q9Y580 266 aaKnown RBP6.3□□□□□ -1.4
VTI1B-206ENST00000556461 A0A0A6YYH2 397 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 A6NJ64 397 aa6.29□□□□□ -1.4
VTI1B-206ENST00000556461 I3L521 148 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms