RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 OR51F2Q8NH61 342 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 SIGLEC12Q96PQ1 595 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 VAMP8Q9BV40 100 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 CHST6Q9GZX3 395 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 MRPL16Q9NX20 251 aaKnown RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 FBLN5Q9UBX5 448 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 R4GN57 208 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 A0A1W2PP11 408 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 C7orf77A4D0Y5 90 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 PSMB11A5LHX3 300 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 MCRIP1C9JLW8 97 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 PPP5D1E7EU14 171 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 CD74P04233 296 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 P04436 131 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 AKAIN1P0CW23 69 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 CD79AP11912 226 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF93P35789 620 aaPredicted RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 H2BFSP57053 126 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 SEC61A1P61619 476 aaKnown RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 GRB2P62993 217 aaKnown RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF474Q6S9Z5 364 aaPredicted RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 Q6ZSR3 168 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 FAM57BQ71RH2 274 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 CHST4Q8NCG5 386 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 BLNKQ8WV28 456 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 HES7Q9BYE0 225 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 OR2D2Q9H210 308 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 LAMTOR2Q9Y2Q5 125 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 PAM16Q9Y3D7 125 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 URB1O60287 2271 aaKnown RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 MED12LQ86YW9 2145 aa4.35□□□□□ -1.71
TMEM260-210ENST00000556422 ZFHX2Q9C0A1 2572 aaPredicted RBP4.35□□□□□ -1.71
TMEM260-210ENST00000556422 CACNA1AO00555 2505 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 C13orf42A0A1B0GVH6 325 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 OR2A4O95047 310 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 IL5P05113 134 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 CRYGSP22914 178 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 HRH1P35367 487 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 SNCAP37840 140 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 RBM11P57052 281 aaKnown RBP4.34□□□□□ -1.71
TMEM260-210ENST00000556422 MRPS34P82930 218 aaKnown RBP4.34□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF787Q6DD87 383 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF841Q6ZN19 808 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 Q6ZN92 141 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 GVQW1Q8N7I0 195 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 OR10D3Q8NH80 312 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 RNF141Q8WVD5 230 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 RNF183Q96D59 192 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 SMIM8Q96KF7 97 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 OR2A7Q96R45 310 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 TBX15Q96SF7 602 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 SYT3Q9BQG1 590 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 WSB1Q9Y6I7 421 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 TNRC6AQ8NDV7 1962 aaKnown RBP4.34□□□□□ -1.71
TMEM260-210ENST00000556422 SPAARA0A1B0GVQ0 90 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 SNRPGP15A8MWD9 76 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 M0QYG6 137 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 CXCL13O43927 109 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 DVL1P1P54792 670 aaPredicted RBP4.34□□□□□ -1.71
TMEM260-210ENST00000556422 TAS2R19P59542 299 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 RAP2BP61225 183 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM241Q24JQ0 296 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 FAM27BQ5VT28 67 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 PLXDC2Q6UX71 529 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 C1QL4Q86Z23 238 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 MUC20Q8N307 709 aaPredicted RBP4.34□□□□□ -1.71
TMEM260-210ENST00000556422 TMEM229BQ8NBD8 167 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 GJC3Q8NFK1 279 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 NUDCD2Q8WVJ2 157 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 ZNF703Q9H7S9 590 aaPredicted RBP4.34□□□□□ -1.71
TMEM260-210ENST00000556422 OR5AC2Q9NZP5 309 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 B4GALT7Q9UBV7 327 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 NAT8Q9UHE5 227 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 TMED3Q9Y3Q3 217 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 PTPRBP23467 1997 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 DMXL2Q8TDJ6 3036 aa4.34□□□□□ -1.71
TMEM260-210ENST00000556422 CACNA1BQ00975 2339 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 NBEAQ8NFP9 2946 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 SYNGR3O43761 229 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 CREBL2O60519 120 aaPredicted RBP4.34□□□□□ -1.72
TMEM260-210ENST00000556422 GNB3P16520 340 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 FAHP16930 419 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 CXCL2P19875 107 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 FAUP35544 74 aaKnown RBP4.34□□□□□ -1.72
TMEM260-210ENST00000556422 GUCA1AP43080 201 aaPredicted RBP4.34□□□□□ -1.72
TMEM260-210ENST00000556422 TMEM50BP56557 158 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 PLP2Q04941 152 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 HSD52Q0P140 79 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 KRTAP27-1Q3LI81 207 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 PRR31Q5SQ13 230 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 DHRS13Q6UX07 377 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 DOK3Q7L591 496 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 C1QL2Q7Z5L3 287 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 STPG4Q8N801 248 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 OR1J1Q8NGS3 322 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 FGFBP3Q8TAT2 258 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 MALSU1Q96EH3 234 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 KIRREL1Q96J84 757 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 HES4Q9HCC6 221 aa4.34□□□□□ -1.72
TMEM260-210ENST00000556422 MBNL3Q9NUK0 354 aaKnown RBP4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms