RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 OR5R1Q8NH85 324 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 MAFIPQ8WZ33 124 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 CREB3L1Q96BA8 519 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 FAM210AQ96ND0 272 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 HDHD3Q9BSH5 251 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-238ENST00000556288 LPAR5Q9H1C0 372 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 C1RLQ9NZP8 487 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 ZNF230Q9UIE0 474 aaPredicted RBP3.73□□□□□ -1.81
ATXN3-238ENST00000556288 PITPNC1Q9UKF7 332 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 VPREB3Q9UKI3 123 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 SIGLEC9Q9Y336 463 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 POMT1Q9Y6A1 747 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 ZFHX3Q15911 3703 aa3.73□□□□□ -1.81
ATXN3-238ENST00000556288 ATRQ13535 2644 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 CLPSL1A2RUU4 121 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 CCDC160A6NGH7 325 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 SH2D7A6NKC9 451 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-238ENST00000556288 TRIM64CA6NLI5 447 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 FAM25AB3EWG3 89 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 FAM25CB3EWG5 89 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 FAM25GB3EWG6 89 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 C15orf65H3BRN8 121 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 CLDN34H7C241 214 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 H7C2Y5 167 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 BET1O15155 118 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 SLC31A2O15432 143 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 SCTP09683 121 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 FAM106CPP0CH98 169 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 CGB3P0DN86 165 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 CGB7P0DN87 165 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 TMEM11P17152 192 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 GALP22466 123 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 TMEM50BP56557 158 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 KRTAP10-7P60409 375 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-238ENST00000556288 QRFPP83859 136 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 DIAPH2-AS1Q14236 149 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 GNMTQ14749 295 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 HLA-DRB5Q30154 266 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 MOGAT2Q3SYC2 334 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 MORN2Q502X0 79 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 LDLRAD2Q5SZI1 272 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 TPTE2P1Q5T6R2 138 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 MINOS1Q5TGZ0 78 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 HIST2H2BDQ6DRA6 164 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 SFXN4Q6P4A7 337 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 CD200R1LQ6Q8B3 271 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 GPR141Q7Z602 305 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 CENPVQ7Z7K6 275 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-238ENST00000556288 LYPD6Q86Y78 171 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 TMEM86BQ8N661 226 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 OR10A7Q8NGE5 316 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 OR5H6Q8NGV6 325 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 OR56B4Q8NH76 319 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 OR2T6Q8NHC8 308 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 MRPL30Q8TCC3 161 aaKnown RBP3.72□□□□□ -1.81
ATXN3-238ENST00000556288 RBMXL1Q96E39 390 aaKnown RBP3.72□□□□□ -1.81
ATXN3-238ENST00000556288 YIPF6Q96EC8 236 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 S100A16Q96FQ6 103 aaKnown RBP3.72□□□□□ -1.81
ATXN3-238ENST00000556288 GINS4Q9BRT9 223 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 FUNDC2Q9BWH2 189 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 TM2D1Q9BX74 207 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 NPFFR1Q9GZQ6 430 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 RBM38Q9H0Z9 239 aaKnown RBP3.72□□□□□ -1.81
ATXN3-238ENST00000556288 MMP28Q9H239 520 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 RIMS4Q9H426 269 aaPredicted RBP3.72□□□□□ -1.81
ATXN3-238ENST00000556288 NCOR1P1Q9H4R4 102 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 RAB18Q9NP72 206 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 DIABLOQ9NR28 239 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 COMMD3Q9UBI1 195 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 MRPS7Q9Y2R9 242 aaKnown RBP3.72□□□□□ -1.81
ATXN3-238ENST00000556288 MINOS1-NBL1R4GNA1 71 aa3.72□□□□□ -1.81
ATXN3-238ENST00000556288 FBN1P35555 2871 aaKnown RBP3.72□□□□□ -1.81
ATXN3-238ENST00000556288 STAB1Q9NY15 2570 aa3.71□□□□□ -1.81
ATXN3-238ENST00000556288 RPS10-NUDT3A0A1W2PQS6 291 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 MEIS3P1A6NDR6 274 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 ODF3BA8MYP8 253 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 TRDCB7Z8K6 153 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 NPIPB11E5RHQ5 1161 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 HSD17B6O14756 317 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 TIMM23O14925 209 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 NOL3O60936 208 aaKnown RBP3.71□□□□□ -1.82
ATXN3-238ENST00000556288 CA11O75493 328 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 TOMM40O96008 361 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 IGKV1D-33P01593 117 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 IGKV1-33P01594 117 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 TFAP2AP05549 437 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 SNRNP70P08621 437 aaKnown RBP3.71□□□□□ -1.82
ATXN3-238ENST00000556288 GSTT2P0CG29 244 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 GSTT2BP0CG30 244 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 ZBTB25P24278 435 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 OR3A3P47888 321 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 ALDH3B2P48448 385 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 RAB7AP51149 207 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 GNG2P59768 71 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 NCS1P62166 190 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 BLCAPP62952 87 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 ABCA11PQ4W5N1 156 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 CT45A1Q5HYN5 189 aa3.71□□□□□ -1.82
ATXN3-238ENST00000556288 CCBE1Q6UXH8 406 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms