RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 H7BYZ3 331 aa12.55□□□□□ -0.4
NEK9-209ENST00000556170 TMPRSS2O15393 492 aa12.55□□□□□ -0.4
NEK9-209ENST00000556170 KDF1Q8NAX2 398 aaPredicted RBP12.55□□□□□ -0.4
NEK9-209ENST00000556170 ACTR3CQ9C0K3 210 aaPredicted RBP12.55□□□□□ -0.4
NEK9-209ENST00000556170 ANAPC10Q9UM13 185 aa12.55□□□□□ -0.4
NEK9-209ENST00000556170 IGF2RP11717 2491 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 ZG16O60844 167 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 GABRA6Q16445 453 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 PINX1Q96BK5 328 aaKnown RBP12.54□□□□□ -0.4
NEK9-209ENST00000556170 TAAR6Q96RI8 345 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 WIPI2Q9Y4P8 454 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 A0A0G2JRQ6 117 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 RAB4AP20338 218 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 KITLGP21583 273 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 PKIAP61925 76 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 MDS2Q8NDY4 140 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 ITLN1Q8WWA0 313 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 SSMEM1Q8WWF3 244 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 GINS3Q9BRX5 216 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 TRGV10A0A0A0MS01 117 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 CLDN14O95500 239 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 TDGF1P13385 188 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 MST1LQ2TV78 715 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 COLCA1Q6ZS62 124 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 H1FOOQ8IZA3 346 aaPredicted RBP12.54□□□□□ -0.4
NEK9-209ENST00000556170 TMEM171Q8WVE6 324 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 PATZ1Q9HBE1 687 aaKnown RBP12.54□□□□□ -0.4
NEK9-209ENST00000556170 RAMP3O60896 148 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 MMP9P14780 707 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 GFRALQ6UXV0 394 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 ZDHHC16Q969W1 377 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 CIB3Q96Q77 187 aaPredicted RBP12.54□□□□□ -0.4
NEK9-209ENST00000556170 TMEM204Q9BSN7 226 aa12.54□□□□□ -0.4
NEK9-209ENST00000556170 FOXI3A8MTJ6 420 aaPredicted RBP12.53□□□□□ -0.4
NEK9-209ENST00000556170 WISP2O76076 250 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 NCR3LG1Q68D85 454 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 ZNF343Q6P1L6 599 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 ASCL4Q6XD76 172 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 OR4D5Q8NGN0 318 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 OR13A1Q8NGR1 328 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 TMEM56Q96MV1 263 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 RBKSQ9H477 322 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 CARHSP1Q9Y2V2 147 aaKnown RBP12.53□□□□□ -0.4
NEK9-209ENST00000556170 TMEM56-RWDD3S4R434 201 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 C17orf98A8MV24 154 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 CD55P08174 381 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 TAS2R60P59551 318 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 LRP11Q86VZ4 500 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 RND1Q92730 232 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 KIAA1456Q9P272 454 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 GOLT1BQ9Y3E0 138 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 MED12LQ86YW9 2145 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 GPX4P36969 197 aaPredicted RBP12.53□□□□□ -0.4
NEK9-209ENST00000556170 DHRS7BQ6IAN0 325 aaPredicted RBP12.53□□□□□ -0.4
NEK9-209ENST00000556170 CCL13Q99616 98 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 FGF23Q9GZV9 251 aaPredicted RBP12.53□□□□□ -0.4
NEK9-209ENST00000556170 LAMP3Q9UQV4 416 aa12.53□□□□□ -0.4
NEK9-209ENST00000556170 NUP210LQ5VU65 1888 aa12.52□□□□□ -0.4
NEK9-209ENST00000556170 FAM27E3Q08E93 113 aa12.52□□□□□ -0.4
NEK9-209ENST00000556170 GAMTQ14353 236 aa12.52□□□□□ -0.4
NEK9-209ENST00000556170 ZNF880Q6PDB4 577 aa12.52□□□□□ -0.4
NEK9-209ENST00000556170 PRO3102Q9H379 93 aa12.52□□□□□ -0.4
NEK9-209ENST00000556170 SIRT7Q9NRC8 400 aa12.52□□□□□ -0.4
NEK9-209ENST00000556170 TRGV8A0A0C4DH27 118 aa12.52□□□□□ -0.41
NEK9-209ENST00000556170 DUXBA0A1W2PPF3 345 aa12.52□□□□□ -0.41
NEK9-209ENST00000556170 TMEM210A6NLX4 147 aa12.52□□□□□ -0.41
NEK9-209ENST00000556170 C1orf87Q8N0U7 546 aa12.52□□□□□ -0.41
NEK9-209ENST00000556170 ZCCHC24Q8N2G6 241 aaKnown RBP12.52□□□□□ -0.41
NEK9-209ENST00000556170 SERTAD4Q9NUC0 356 aa12.52□□□□□ -0.41
NEK9-209ENST00000556170 SEC14L6B5MCN3 397 aa12.52□□□□□ -0.41
NEK9-209ENST00000556170 PTBP3O95758 552 aaKnown RBP12.52□□□□□ -0.41
NEK9-209ENST00000556170 RPS23P62266 143 aaKnown RBP12.52□□□□□ -0.41
NEK9-209ENST00000556170 PEAR1Q5VY43 1037 aaPredicted RBP12.52□□□□□ -0.41
NEK9-209ENST00000556170 ZNF324BQ6AW86 544 aaPredicted RBP12.52□□□□□ -0.41
NEK9-209ENST00000556170 CRIP3Q6Q6R5 217 aa12.52□□□□□ -0.41
NEK9-209ENST00000556170 Q6ZRM9 215 aa12.52□□□□□ -0.41
NEK9-209ENST00000556170 HIST1H2BAQ96A08 127 aa12.52□□□□□ -0.41
NEK9-209ENST00000556170 RAB9BQ9NP90 201 aa12.52□□□□□ -0.41
NEK9-209ENST00000556170 LRRC30A6NM36 301 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 GZMHP20718 246 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 REG1BP48304 166 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 ID3Q02535 119 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 REC114Q7Z4M0 266 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 METRNQ9UJH8 293 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 TMEM50AO95807 157 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 PGA5P0DJD9 388 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 CHRNA7P36544 502 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 SPCS3P61009 180 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 LRTM2Q8N967 370 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 KIAA1324LA8MWY0 1029 aaPredicted RBP12.51□□□□□ -0.41
NEK9-209ENST00000556170 CRYABP02511 175 aaKnown RBP12.51□□□□□ -0.41
NEK9-209ENST00000556170 SNRPCP09234 159 aaKnown RBP12.51□□□□□ -0.41
NEK9-209ENST00000556170 DEFA4P12838 97 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 TNFRSF9Q07011 255 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 PLGLAQ15195 96 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 MALSU1Q96EH3 234 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 GPR61Q9BZJ8 451 aa12.51□□□□□ -0.41
NEK9-209ENST00000556170 ATG2AQ2TAZ0 1938 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 ODAMA1E959 279 aa12.5□□□□□ -0.41
NEK9-209ENST00000556170 PAGE4O60829 102 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms