RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 S1PR3Q99500 378 aa9.2□□□□□ -0.94
GABRB3-210ENST00000556166 C7orf50Q9BRJ6 194 aaKnown RBP9.2□□□□□ -0.94
GABRB3-210ENST00000556166 A6NDX4 124 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 DISC1C4P0D8 188 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 H0YJW9 148 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 TNFSF12O43508 249 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 SNRNP70P08621 437 aaKnown RBP9.19□□□□□ -0.94
GABRB3-210ENST00000556166 PI3P19957 117 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 SLC6A1P30531 599 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 DUTP33316 252 aaKnown RBP9.19□□□□□ -0.94
GABRB3-210ENST00000556166 SCGB2A2Q13296 93 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 LY6EQ16553 131 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 PLET1Q6UQ28 207 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 CADM3Q8N126 398 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 BVESQ8NE79 360 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 DUSP18Q8NEJ0 188 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 OR5AN1Q8NGI8 311 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 ZNF418Q8TF45 676 aaPredicted RBP9.19□□□□□ -0.94
GABRB3-210ENST00000556166 SSMEM1Q8WWF3 244 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 DDB2Q92466 427 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 RSRP1Q9BUV0 290 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 DPAGT1Q9H3H5 408 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 MCUBQ9NWR8 336 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 SLC2A8Q9NY64 477 aa9.19□□□□□ -0.94
GABRB3-210ENST00000556166 PGLYRP1O75594 196 aaPredicted RBP9.18□□□□□ -0.94
GABRB3-210ENST00000556166 CD1BP29016 333 aa9.18□□□□□ -0.94
GABRB3-210ENST00000556166 EBI3Q14213 229 aa9.18□□□□□ -0.94
GABRB3-210ENST00000556166 HNF4GQ14541 408 aa9.18□□□□□ -0.94
GABRB3-210ENST00000556166 MSMO1Q15800 293 aa9.18□□□□□ -0.94
GABRB3-210ENST00000556166 RBMS3Q6XE24 437 aaKnown RBP9.18□□□□□ -0.94
GABRB3-210ENST00000556166 IDO2Q6ZQW0 420 aa9.18□□□□□ -0.94
GABRB3-210ENST00000556166 TMEM219Q86XT9 240 aa9.18□□□□□ -0.94
GABRB3-210ENST00000556166 THNSL2Q86YJ6 484 aa9.18□□□□□ -0.94
GABRB3-210ENST00000556166 MARCH1Q8TCQ1 289 aa9.18□□□□□ -0.94
GABRB3-210ENST00000556166 CAPSLQ8WWF8 208 aa9.18□□□□□ -0.94
GABRB3-210ENST00000556166 CHIAQ9BZP6 476 aa9.18□□□□□ -0.94
GABRB3-210ENST00000556166 A0A0B4J293 547 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 NAP1L6A6NFF2 107 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 CLDN34H7C241 214 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 TXNL1O43396 289 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 CHST1O43916 411 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 SLC22A5O76082 557 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 IGKV1D-33P01593 117 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 IGKV1-33P01594 117 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 IGKV1-16P04430 117 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 BRS3P32247 399 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 PHLDA2Q53GA4 152 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 Q8N6K4 173 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 DEDD2Q8WXF8 326 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 TAF15Q92804 592 aaKnown RBP eCLIP9.17□□□□□ -0.94
GABRB3-210ENST00000556166 EAF1Q96JC9 268 aaPredicted RBP9.17□□□□□ -0.94
GABRB3-210ENST00000556166 AKR1E2Q96JD6 320 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 PRRT1Q99946 306 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 RTBDNQ9BSG5 229 aaPredicted RBP9.17□□□□□ -0.94
GABRB3-210ENST00000556166 PLSCR3Q9NRY6 295 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 GPR132Q9UNW8 380 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 TCF19Q9Y242 345 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 POMT1Q9Y6A1 747 aa9.17□□□□□ -0.94
GABRB3-210ENST00000556166 TRAV6A0A075B6T7 132 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 A0A0A6YYJ9 748 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 GPR31O00270 319 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 TCF21O43680 179 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 TCRBP04435 133 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 FAM106CPP0CH98 169 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 PGAM2P15259 253 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 FAUP35544 74 aaKnown RBP9.16□□□□□ -0.94
GABRB3-210ENST00000556166 F2RL1P55085 397 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 RAB25P57735 213 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 UBA52P62987 128 aaKnown RBP9.16□□□□□ -0.94
GABRB3-210ENST00000556166 SLC38A6Q8IZM9 456 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 TMEM86BQ8N661 226 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 ZBTB34Q8NCN2 500 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 OR5R1Q8NH85 324 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 C5orf66Q9H5L9 145 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 NUDT15Q9NV35 164 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 SCP2D1Q9UJQ7 156 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 VSIG4Q9Y279 399 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 INMT-MINDY4F8WBC2 141 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 PFDN1O60925 122 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 CNTFRP26992 372 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 THBS3P49746 956 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 OR2B11Q5JQS5 317 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 LPCAT3Q6P1A2 487 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 ZNF66Q6ZN08 573 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 ADAD2Q8NCV1 583 aaKnown RBP9.16□□□□□ -0.94
GABRB3-210ENST00000556166 HSD17B10Q99714 261 aaKnown RBP9.16□□□□□ -0.94
GABRB3-210ENST00000556166 MARVELD1Q9BSK0 173 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 VPREB3Q9UKI3 123 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 NUBP2Q9Y5Y2 271 aa9.16□□□□□ -0.94
GABRB3-210ENST00000556166 SRRM4A7MD48 611 aaKnown RBP9.15□□□□□ -0.95
GABRB3-210ENST00000556166 GPR137BO60478 399 aa9.15□□□□□ -0.95
GABRB3-210ENST00000556166 MOSP00540 346 aa9.15□□□□□ -0.95
GABRB3-210ENST00000556166 AMY1AP04745 511 aa9.15□□□□□ -0.95
GABRB3-210ENST00000556166 CTSDP07339 412 aaPredicted RBP9.15□□□□□ -0.95
GABRB3-210ENST00000556166 RNASE1P07998 156 aaKnown RBP9.15□□□□□ -0.95
GABRB3-210ENST00000556166 VSIG10L2P0DP72 767 aa9.15□□□□□ -0.95
GABRB3-210ENST00000556166 MC5RP33032 325 aa9.15□□□□□ -0.95
GABRB3-210ENST00000556166 ARHGDIBP52566 201 aa9.15□□□□□ -0.95
GABRB3-210ENST00000556166 HES1Q14469 280 aa9.15□□□□□ -0.95
GABRB3-210ENST00000556166 OR2T10Q8NGZ9 312 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms