RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 ZBTB34Q8NCN2 500 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 RNASE8Q8TDE3 154 aaKnown RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 SEH1LQ96EE3 360 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 FAHD2AQ96GK7 314 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 RCC1LQ96I51 464 aaKnown RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 SLC6A7Q99884 636 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 OR10A2Q9H208 303 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 OR51I2Q9H344 312 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 PLEKHA2Q9HB19 425 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 PATZ1Q9HBE1 687 aaKnown RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 DECR2Q9NUI1 292 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 OR5AC2Q9NZP5 309 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 GNG8Q9UK08 70 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 MPC1Q9Y5U8 109 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 PUS1Q9Y606 427 aaKnown RBP eCLIP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 ARID1AO14497 2285 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 B4DSR2 109 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 RAB27BO00194 218 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 TCF21O43680 179 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 ZFPL1O95159 310 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 DUS4LO95620 317 aaKnown RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 AMBPP02760 352 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 TK1P04183 234 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 H2BFMP0C1H6 154 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 OR5AC1P0C628 307 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 OR13C7P0DN81 318 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 EGR1P18146 543 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 AMY2BP19961 511 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 HNF1AP20823 631 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 CHATP28329 748 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 MDH2P40926 338 aaKnown RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 NANOS3P60323 173 aaKnown RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 ERVK11-1P61568 191 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 HOXA4Q00056 320 aaPredicted RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 PAX8Q06710 450 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 ZNF154Q13106 437 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 HERPUD1Q15011 391 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 CEACAM21Q3KPI0 293 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 FAM120AOSQ5T036 256 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 SAMD5Q5TGI4 173 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 NCR3LG1Q68D85 454 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 ASPHD2Q6ICH7 369 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 ETFRF1Q6IPR1 90 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 FAM166AQ6J272 317 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 KCTD18Q6PI47 426 aaPredicted RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 C9orf139Q6ZV77 190 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 Q71RC1 249 aaPredicted RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 MRPL21Q7Z2W9 205 aaKnown RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 C1QL2Q7Z5L3 287 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 TMEM183AQ8IXX5 376 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 ZDHHC22Q8N966 263 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 LY6G5BQ8NDX9 201 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 DEFB108BQ8NET1 73 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 CSNK2A3Q8NEV1 391 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 SEMA6DQ8NFY4 1073 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 OR51D1Q8NGF3 324 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 CASTOR1Q8WTX7 329 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 LPAR2Q9HBW0 351 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 SLC2A8Q9NY64 477 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 CTSZQ9UBR2 303 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 ZNF107Q9UII5 783 aaPredicted RBP3.24□□□□□ -1.89
LINC00648-202ENST00000555985 OR52A1Q9UKL2 312 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 SLC22A13Q9Y226 551 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 CREBBPQ92793 2442 aa3.24□□□□□ -1.89
LINC00648-202ENST00000555985 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.23□□□□□ -1.89
LINC00648-202ENST00000555985 MALRD1Q5VYJ5 2156 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 A0A1B0GW64 132 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 CEACAM18A8MTB9 384 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 SRRM5B3KS81 715 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 ZNF736B4DX44 427 aaPredicted RBP3.23□□□□□ -1.89
LINC00648-202ENST00000555985 J3QLI3 93 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 CIDEAO60543 219 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 DHRS3O75911 302 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 NXPH2O95156 264 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 CYB5R3P00387 301 aaPredicted RBP3.23□□□□□ -1.89
LINC00648-202ENST00000555985 GAPDHP04406 335 aaKnown RBP3.23□□□□□ -1.89
LINC00648-202ENST00000555985 PGA5P0DJD9 388 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 CD37P11049 281 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 LMO1P25800 156 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 TAGLN2P37802 199 aaKnown RBP3.23□□□□□ -1.89
LINC00648-202ENST00000555985 Q499Y3 187 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 SOHLH1Q5JUK2 328 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 C1orf194Q5T5A4 169 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 PRAMEF6Q5VXH4 476 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 STUMQ69YW2 141 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 MOGAT3Q86VF5 341 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 SLC35G3Q8N808 338 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 BHLHE23Q8NDY6 225 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 OR52N4Q8NGI2 321 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 OR5AK2Q8NH90 309 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 C8orf46Q8TAG6 207 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 RAB1CQ92928 201 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 MRGPRFQ96AM1 343 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 C10orf35Q96D05 121 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 RAB39BQ96DA2 213 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 PRRT1Q99946 306 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 URM1Q9BTM9 101 aaKnown RBP3.23□□□□□ -1.89
LINC00648-202ENST00000555985 PBDC1Q9BVG4 233 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 CENPMQ9NSP4 180 aa3.23□□□□□ -1.89
LINC00648-202ENST00000555985 FRRS1LQ9P0K9 344 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms