RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 DDB2Q92466 427 aa6.33□□□□□ -1.4
PCNX4-210ENST00000555740 ADTRPQ96IZ2 230 aa6.33□□□□□ -1.4
PCNX4-210ENST00000555740 Q96MF0 132 aa6.33□□□□□ -1.4
PCNX4-210ENST00000555740 HSD17B10Q99714 261 aaKnown RBP6.33□□□□□ -1.4
PCNX4-210ENST00000555740 SEC22CQ9BRL7 303 aa6.33□□□□□ -1.4
PCNX4-210ENST00000555740 OR51J1Q9H342 316 aa6.33□□□□□ -1.4
PCNX4-210ENST00000555740 LIN7CQ9NUP9 197 aaKnown RBP6.33□□□□□ -1.4
PCNX4-210ENST00000555740 SDHAF2Q9NX18 166 aa6.33□□□□□ -1.4
PCNX4-210ENST00000555740 FASNP49327 2511 aaKnown RBP6.33□□□□□ -1.4
PCNX4-210ENST00000555740 TACC2O95359 2948 aa6.33□□□□□ -1.4
PCNX4-210ENST00000555740 SAA2-SAA4A0A096LPE2 208 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 A0A1B0GVG6 124 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 DUXBA0A1W2PPF3 345 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 DBX1A6NMT0 343 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 RAB29O14966 203 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 PGLYRP1O75594 196 aaPredicted RBP6.32□□□□□ -1.4
PCNX4-210ENST00000555740 LY86O95711 162 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 SAA2P0DJI9 122 aaPredicted RBP6.32□□□□□ -1.4
PCNX4-210ENST00000555740 HLA-GP17693 338 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 NFYBP25208 207 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 UCP1P25874 307 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 KIR2DS2P43631 304 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 BCAP31P51572 246 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 ZNF816Q0VGE8 651 aaPredicted RBP6.32□□□□□ -1.4
PCNX4-210ENST00000555740 TMEM187Q14656 261 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 VMO1Q7Z5L0 202 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 TBC1D26Q86UD7 250 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 SGPP2Q8IWX5 399 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 OR4P4Q8NGL7 312 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 CAPSLQ8WWF8 208 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 ASB13Q8WXK3 278 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 PCGF1Q9BSM1 259 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 HEXA-AS1Q9H8Q6 139 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 MMP26Q9NRE1 261 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 KCNS2Q9ULS6 477 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 TBL2Q9Y4P3 447 aaKnown RBP6.32□□□□□ -1.4
PCNX4-210ENST00000555740 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.32□□□□□ -1.43e-21■■■■■ 41.7
PCNX4-210ENST00000555740 MEX3AA1L020 520 aaKnown RBP6.32□□□□□ -1.4
PCNX4-210ENST00000555740 OOSP1A8MZH6 123 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 HSD17B6O14756 317 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 IFNA2P01563 188 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 HLA-AP01891 365 aaKnown RBP6.32□□□□□ -1.4
PCNX4-210ENST00000555740 SULT1A3P0DMM9 295 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 SULT1A4P0DMN0 295 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 ANXA3P12429 323 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 F2RP25116 425 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 DUTP33316 252 aaKnown RBP6.32□□□□□ -1.4
PCNX4-210ENST00000555740 THBS3P49746 956 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 PRRX1P54821 245 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 RRAS2P62070 204 aaPredicted RBP6.32□□□□□ -1.4
PCNX4-210ENST00000555740 RPS16P62249 146 aaKnown RBP6.32□□□□□ -1.4
PCNX4-210ENST00000555740 CATR1Q13166 79 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 LTC4SQ16873 150 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 PHLDA2Q53GA4 152 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 MINOS1Q5TGZ0 78 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 LIN54Q6MZP7 749 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 ETV3LQ6ZN32 361 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 CADM3Q8N126 398 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 ABHD12Q8N2K0 398 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 TMEM186Q96B77 213 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 TMEM56Q96MV1 263 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 TMEM222Q9H0R3 208 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 MINOS1-NBL1R4GNA1 71 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 TMEM56-RWDD3S4R434 201 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 POLQO75417 2590 aa6.32□□□□□ -1.4
PCNX4-210ENST00000555740 SPG11Q96JI7 2443 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 TEX13DA0A0J9YY54 714 aaPredicted RBP6.31□□□□□ -1.4
PCNX4-210ENST00000555740 C3orf85A0A1B0GTC6 90 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 HMX3A6NHT5 357 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 PROP1O75360 226 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 FSHBP01225 129 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 PI3P19957 117 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 UBE2E1P51965 193 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 RAB25P57735 213 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 SRSF4Q08170 494 aaKnown RBP6.31□□□□□ -1.4
PCNX4-210ENST00000555740 TMEM249Q2WGJ8 235 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 LEAP2Q969E1 77 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 MSI2Q96DH6 328 aaKnown RBP6.31□□□□□ -1.4
PCNX4-210ENST00000555740 ITGB1BP2Q9UKP3 347 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 RNASEK-C17orf49H0YIS7 233 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 TOX4O94842 621 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 RPA2P15927 270 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 GNG10P50151 68 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 ARF6P62330 175 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 HABP2Q14520 560 aaPredicted RBP6.31□□□□□ -1.4
PCNX4-210ENST00000555740 ANKRD55Q3KP44 614 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 MIDNQ504T8 468 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 KHDC1LQ5JSQ8 128 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 OR52B4Q8NGK2 314 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 COQ8AQ8NI60 647 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 ABHD14BQ96IU4 210 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 S1PR3Q99500 378 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 COMMD9Q9P000 198 aa6.31□□□□□ -1.4
PCNX4-210ENST00000555740 BUB1B-PAK6H3BSN5 160 aa6.3□□□□□ -1.4
PCNX4-210ENST00000555740 TOR1AO14656 332 aa6.3□□□□□ -1.4
PCNX4-210ENST00000555740 OR5AC1P0C628 307 aa6.3□□□□□ -1.4
PCNX4-210ENST00000555740 P0C879 139 aa6.3□□□□□ -1.4
PCNX4-210ENST00000555740 AKR1C4P17516 323 aa6.3□□□□□ -1.4
PCNX4-210ENST00000555740 DHRS7BQ6IAN0 325 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms