RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PDPNQ86YL7 162 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 ZNF695Q8IW36 515 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 CASTOR1Q8WTX7 329 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 CAPSLQ8WWF8 208 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 MRGPRFQ96AM1 343 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 FAM212BQ9NTI7 297 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-220ENST00000555634 SLC35D1Q9NTN3 355 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 FLVCR2Q9UPI3 526 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 WASHC3Q9Y3C0 194 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 HILPDAQ9Y5L2 63 aa9.1□□□□□ -0.95
SHMT2-220ENST00000555634 IGHV1-3A0A0C4DH29 117 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 SNRPGP15A8MWD9 76 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 RBFOX2O43251 390 aaKnown RBP eCLIP9.09□□□□□ -0.955e-15■■■■■ 33.3
SHMT2-220ENST00000555634 FCGR3BO75015 233 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 SFT2D2O95562 160 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 DUS4LO95620 317 aaKnown RBP9.09□□□□□ -0.95
SHMT2-220ENST00000555634 IFNA21P01568 189 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 IL5P05113 134 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 DUTP33316 252 aaKnown RBP9.09□□□□□ -0.95
SHMT2-220ENST00000555634 REG1BP48304 166 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 DLX1P56177 255 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 PRB3Q04118 309 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-220ENST00000555634 DHRS2Q13268 280 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 PPP1R1AQ13522 171 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 HES1Q14469 280 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 SLC9A3R2Q15599 337 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 OR2B11Q5JQS5 317 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 FAM53AQ6NSI3 398 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-220ENST00000555634 RBMS3Q6XE24 437 aaKnown RBP9.09□□□□□ -0.95
SHMT2-220ENST00000555634 BRD3OSQ6XYD6 125 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 ODF3L1Q8IXM7 274 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 SPAG16Q8N0X2 631 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 LGI3Q8N145 548 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 ADAD2Q8NCV1 583 aaKnown RBP9.09□□□□□ -0.95
SHMT2-220ENST00000555634 ZNF431Q8TF32 576 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-220ENST00000555634 RTBDNQ9BSG5 229 aaPredicted RBP9.09□□□□□ -0.95
SHMT2-220ENST00000555634 BEX2Q9BXY8 128 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 MRPL20Q9BYC9 149 aaKnown RBP9.09□□□□□ -0.95
SHMT2-220ENST00000555634 BEX1Q9HBH7 125 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 TMEM160Q9NX00 188 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 COMMD9Q9P000 198 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 CDC42EP3Q9UKI2 254 aa9.09□□□□□ -0.95
SHMT2-220ENST00000555634 IGHV3OR16-10A0A075B7F0 116 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 DUXBA0A1W2PPF3 345 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 C9orf170A2RU37 121 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 HRASP01112 189 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 OR5AC1P0C628 307 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 FAM106CPP0CH98 169 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 IGHV4-38-2P0DP08 117 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 SPNP16150 400 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 FAM120AOSQ5T036 256 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 THOC7Q6I9Y2 204 aaKnown RBP9.08□□□□□ -0.96
SHMT2-220ENST00000555634 HCP5Q6MZN7 132 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 CLEC9AQ6UXN8 241 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 DRAXINQ8NBI3 349 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-220ENST00000555634 OR4C13Q8NGP0 309 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 VSTM2AQ8TAG5 236 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 OSR1Q8TAX0 266 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-220ENST00000555634 IL22RA2Q969J5 263 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 ZDHHC16Q969W1 377 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 RRNAD1Q96FB5 475 aaKnown RBP9.08□□□□□ -0.96
SHMT2-220ENST00000555634 GALNT14Q96FL9 552 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 SPIN2AQ99865 258 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 SPIN2BQ9BPZ2 258 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 TMEM222Q9H0R3 208 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 ZNRD1Q9P1U0 126 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 ABCA1O95477 2261 aa9.08□□□□□ -0.96
SHMT2-220ENST00000555634 SHOXO15266 292 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 CRYZL1O95825 349 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 HPRT1P00492 218 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 IGLV2-14P01704 120 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 LRRC75BQ2VPJ9 315 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 TMEM268Q5VZI3 342 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 RUSC1-AS1Q66K80 236 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 LHFPL4Q7Z7J7 247 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 LDLRAD3Q86YD5 345 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 UXS1Q8NBZ7 420 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 DMBX1Q8NFW5 382 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 OR2T10Q8NGZ9 312 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 RBPMSQ93062 196 aaKnown RBP9.07□□□□□ -0.96
SHMT2-220ENST00000555634 ST6GALNAC6Q969X2 333 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 FLYWCH2Q96CP2 140 aaKnown RBP9.07□□□□□ -0.96
SHMT2-220ENST00000555634 HARBI1Q96MB7 349 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 TSNAXQ99598 290 aaKnown RBP9.07□□□□□ -0.96
SHMT2-220ENST00000555634 NABP2Q9BQ15 211 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 MED28Q9H204 178 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 PLEKHA2Q9HB19 425 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 KIAA1456Q9P272 454 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 PITPNC1Q9UKF7 332 aa9.07□□□□□ -0.96
SHMT2-220ENST00000555634 A0A0U1RQK1 487 aa9.06□□□□□ -0.96
SHMT2-220ENST00000555634 A0A1W2PPI3 338 aa9.06□□□□□ -0.96
SHMT2-220ENST00000555634 C7orf66A4D0T2 115 aa9.06□□□□□ -0.96
SHMT2-220ENST00000555634 H0YJW9 148 aa9.06□□□□□ -0.96
SHMT2-220ENST00000555634 TIMM23O14925 209 aa9.06□□□□□ -0.96
SHMT2-220ENST00000555634 NQO2P16083 231 aa9.06□□□□□ -0.96
SHMT2-220ENST00000555634 SRD5A1P18405 259 aa9.06□□□□□ -0.96
SHMT2-220ENST00000555634 UCP1P25874 307 aa9.06□□□□□ -0.96
SHMT2-220ENST00000555634 CD1BP29016 333 aa9.06□□□□□ -0.96
SHMT2-220ENST00000555634 PLGLAQ15195 96 aa9.06□□□□□ -0.96
SHMT2-220ENST00000555634 AANATQ16613 207 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms