RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 PPP1R27Q86WC6 154 aa10.73□□□□□ -0.69
PCNX4-209ENST00000555569 PDPNQ86YL7 162 aa10.73□□□□□ -0.69
PCNX4-209ENST00000555569 OR1N2Q8NGR9 330 aa10.73□□□□□ -0.69
PCNX4-209ENST00000555569 CLCC1Q96S66 551 aa10.73□□□□□ -0.69
PCNX4-209ENST00000555569 GAB2Q9UQC2 676 aa10.73□□□□□ -0.69
PCNX4-209ENST00000555569 TRBV6-7A0A0A0MS04 114 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 SMIM30A4D0T7 59 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 SOX15O60248 233 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 DIRAS3O95661 229 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 OR8U9P0C7N5 309 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 PSMB9P28065 219 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 CD69Q07108 199 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 ARFRP1Q13795 201 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 UNQ5815/PRO19632Q6UWF5 114 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 ZNF562Q6V9R5 426 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 NR2C2APQ86WQ0 139 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 SPARTQ8N0X7 666 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 OR10J5Q8NHC4 309 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 MAFIPQ8WZ33 124 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 FCGR1BQ92637 280 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 FLYWCH2Q96CP2 140 aaKnown RBP10.72□□□□□ -0.69
PCNX4-209ENST00000555569 YTHDF1Q9BYJ9 559 aaKnown RBP10.72□□□□□ -0.69
PCNX4-209ENST00000555569 OR2D2Q9H210 308 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 Q9H521 79 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 SLC35D1Q9NTN3 355 aa10.72□□□□□ -0.69
PCNX4-209ENST00000555569 ZNF230Q9UIE0 474 aaPredicted RBP10.72□□□□□ -0.69
PCNX4-209ENST00000555569 SLC25A17O43808 307 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 CA2P00918 260 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 FGF9P31371 208 aaPredicted RBP10.71□□□□□ -0.69
PCNX4-209ENST00000555569 TALDO1P37837 337 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 ECI1P42126 302 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 COL7A1Q02388 2944 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 ZNF260Q3ZCT1 412 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 AKIRIN2Q53H80 203 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 ACTBL2Q562R1 376 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 PYHIN1Q6K0P9 492 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 CASTOR1Q8WTX7 329 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 B9D2Q9BPU9 175 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 GINS4Q9BRT9 223 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 FAM103A1Q9BTL3 118 aaKnown RBP10.71□□□□□ -0.69
PCNX4-209ENST00000555569 ATG5Q9H1Y0 275 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 TXNL4BQ9NX01 149 aaKnown RBP10.71□□□□□ -0.69
PCNX4-209ENST00000555569 SDHAF2Q9NX18 166 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 SCOCQ9UIL1 159 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 STUB1Q9UNE7 303 aa10.71□□□□□ -0.69
PCNX4-209ENST00000555569 NOTOA8MTQ0 251 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 SNRPBP14678 240 aaKnown RBP10.7□□□□□ -0.7
PCNX4-209ENST00000555569 ARL6IP1Q15041 203 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 SRSF7Q16629 238 aaKnown RBP eCLIP10.7□□□□□ -0.7
PCNX4-209ENST00000555569 VAX1Q5SQQ9 334 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 C11orf87Q6NUJ2 197 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 Q6ZS49 121 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 LFNGQ8NES3 379 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 ARPC1AQ92747 370 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 PRR25Q96S07 402 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 CENPOQ9BU64 300 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 ALX4Q9H161 411 aaPredicted RBP10.7□□□□□ -0.7
PCNX4-209ENST00000555569 TPSG1Q9NRR2 321 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 RBM7Q9Y580 266 aaKnown RBP10.7□□□□□ -0.7
PCNX4-209ENST00000555569 TNCP24821 2201 aa10.7□□□□□ -0.7
PCNX4-209ENST00000555569 LINC01619G3V211 115 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 LGALS1P09382 135 aaKnown RBP10.69□□□□□ -0.7
PCNX4-209ENST00000555569 DTYMKP23919 212 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 CD40LGP29965 261 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 LGALS7P47929 136 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 INSL3P51460 131 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 TAGLNQ01995 201 aaKnown RBP10.69□□□□□ -0.7
PCNX4-209ENST00000555569 CBX3Q13185 183 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 FXYD3Q14802 87 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 CDNFQ49AH0 187 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 TPRA1Q86W33 373 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 GRPEL2Q8TAA5 225 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 DCUN1D4Q92564 292 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 C5orf30Q96GV9 206 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 MS4A10Q96PG2 267 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.69□□□□□ -0.7
PCNX4-209ENST00000555569 ELF5Q9UKW6 265 aaPredicted RBP10.69□□□□□ -0.7
PCNX4-209ENST00000555569 SSR3Q9UNL2 185 aa10.69□□□□□ -0.7
PCNX4-209ENST00000555569 IGKV1D-8A0A087WSZ0 117 aa10.68□□□□□ -0.7
PCNX4-209ENST00000555569 OVOL1O14753 267 aa10.68□□□□□ -0.7
PCNX4-209ENST00000555569 ARPC1BO15143 372 aaKnown RBP10.68□□□□□ -0.7
PCNX4-209ENST00000555569 CNIH1O95406 144 aa10.68□□□□□ -0.7
PCNX4-209ENST00000555569 IGLV2-23P01705 113 aa10.68□□□□□ -0.7
PCNX4-209ENST00000555569 SLURP1P55000 103 aa10.68□□□□□ -0.7
PCNX4-209ENST00000555569 TPPP2P59282 170 aa10.68□□□□□ -0.7
PCNX4-209ENST00000555569 H1FOOQ8IZA3 346 aaPredicted RBP10.68□□□□□ -0.7
PCNX4-209ENST00000555569 BVESQ8NE79 360 aa10.68□□□□□ -0.7
PCNX4-209ENST00000555569 HARBI1Q96MB7 349 aa10.68□□□□□ -0.7
PCNX4-209ENST00000555569 DAPK2Q9UIK4 370 aa10.68□□□□□ -0.7
PCNX4-209ENST00000555569 DNAH9Q9NYC9 4486 aa10.68□□□□□ -0.7
PCNX4-209ENST00000555569 IGHV4OR15-8A0A075B7B6 117 aa10.67□□□□□ -0.7
PCNX4-209ENST00000555569 A0A087WW49 117 aa10.67□□□□□ -0.7
PCNX4-209ENST00000555569 SHOXO15266 292 aa10.67□□□□□ -0.7
PCNX4-209ENST00000555569 IGHV3-11P01762 117 aa10.67□□□□□ -0.7
PCNX4-209ENST00000555569 TRGV3P03979 118 aa10.67□□□□□ -0.7
PCNX4-209ENST00000555569 HSPB1P04792 205 aaKnown RBP10.67□□□□□ -0.7
PCNX4-209ENST00000555569 CRYGBP07316 175 aa10.67□□□□□ -0.7
PCNX4-209ENST00000555569 RRASP10301 218 aa10.67□□□□□ -0.7
PCNX4-209ENST00000555569 SSBP2P81877 361 aaPredicted RBP10.67□□□□□ -0.7
PCNX4-209ENST00000555569 RTL8BQ17RB0 113 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms