RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 PLB1Q6P1J6 1458 aa0.66□□□□□ -2.3
SCFD1-216ENST00000555550 IGHV3-15A0A0B4J1V0 119 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 GOLGA8IPA6NC78 632 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 METTL15A6NJ78 407 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 GOLGA8KD6RF30 607 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 GOLGA8MH3BSY2 632 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 CXCR6O00574 342 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 YEATS4O95619 227 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 SNAP29O95721 258 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 OR13C7P0DN81 318 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 GADD45AP24522 165 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 CRYBB3P26998 211 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 CD200P41217 278 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 MAGEA2P43356 314 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 HSPA13P48723 471 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 H2BFSP57053 126 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 TSPEAR-AS2P59090 65 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 CXCR4P61073 352 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 UAP1Q16222 522 aaPredicted RBP0.65□□□□□ -2.31
SCFD1-216ENST00000555550 FAM151BQ6UXP7 276 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 PLEKHG7Q6ZR37 379 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 TMEM86BQ8N661 226 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 TMEM161BQ8NDZ6 487 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 OR8J2Q8NGG1 315 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 DTD1Q8TEA8 209 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 C16orf78Q8WTQ4 265 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 GALMQ96C23 342 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 PACRGQ96M98 296 aaPredicted RBP0.65□□□□□ -2.31
SCFD1-216ENST00000555550 RBP7Q96R05 134 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 OR7D2Q96RA2 312 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 C7orf50Q9BRJ6 194 aaKnown RBP0.65□□□□□ -2.31
SCFD1-216ENST00000555550 TIMM21Q9BVV7 248 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 CDCA4Q9BXL8 241 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 NSRP1Q9H0G5 558 aaKnown RBP0.65□□□□□ -2.31
SCFD1-216ENST00000555550 HDHD2Q9H0R4 259 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 SMDT1Q9H4I9 107 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 COMMD9Q9P000 198 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 TMEM216Q9P0N5 145 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 SOX21Q9Y651 276 aaPredicted RBP0.65□□□□□ -2.31
SCFD1-216ENST00000555550 KIF15Q9NS87 1388 aa0.65□□□□□ -2.31
SCFD1-216ENST00000555550 MYO3BQ8WXR4 1341 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 ZFYVE9O95405 1425 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 DICER1Q9UPY3 1922 aaKnown RBP0.64□□□□□ -2.31
SCFD1-216ENST00000555550 A0A1B0GVG6 124 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 K7EQS6 105 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 REG1AP05451 166 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 CCL5P13501 91 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 AKR1C4P17516 323 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 PSMA1P25786 263 aaKnown RBP0.64□□□□□ -2.31
SCFD1-216ENST00000555550 CD40LGP29965 261 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 AGTR1P30556 359 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 OR10J1P30954 320 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 HOXA6P31267 233 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 IFNGR2P38484 337 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 OR1E2P47887 323 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 MYL6P60660 151 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 ACTBP60709 375 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 DAD1P61803 113 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 HERVK_113P63121 156 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 ACTG1P63261 375 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 COQ5Q5HYK3 327 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 FAM201AQ5SY85 155 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 C1orf194Q5T5A4 169 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 AGTRAPQ6RW13 159 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 ZNF550Q7Z398 422 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 DOLPP1Q86YN1 238 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 GPHB5Q86YW7 130 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 C1orf174Q8IYL3 243 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 OR1M1Q8NGA1 313 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 SPACA4Q8TDM5 124 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 EEF1AKMT1Q8WVE0 214 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 IFT81Q8WYA0 676 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 KCTD7Q96MP8 289 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 PECRQ9BY49 303 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 DERL2Q9GZP9 239 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 MED28Q9H204 178 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 XPNPEP1Q9NQW7 623 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 BABAM2Q9NXR7 383 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 PRO2289Q9P1D8 64 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 COQ4Q9Y3A0 265 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 FAM215AQ9Y5M1 114 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 ADCY9O60503 1353 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 ABCC11Q96J66 1382 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 MDN1Q9NU22 5596 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 ANKRD17O75179 2603 aaKnown RBP0.64□□□□□ -2.31
SCFD1-216ENST00000555550 PTPRJQ12913 1337 aa0.64□□□□□ -2.31
SCFD1-216ENST00000555550 ZNF469Q96JG9 3925 aaPredicted RBP0.63□□□□□ -2.31
SCFD1-216ENST00000555550 IGKV2-40A0A087WW87 121 aaPredicted RBP0.63□□□□□ -2.31
SCFD1-216ENST00000555550 TMED7-TICAM2A0A0A6YYA0 188 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 EVPLLA8MZ36 301 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 M0R381 172 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 IGKV2D-40P01614 121 aaPredicted RBP0.63□□□□□ -2.31
SCFD1-216ENST00000555550 CRYBA1P05813 215 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 SERPINA6P08185 405 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 OCMP0CE72 109 aaPredicted RBP0.63□□□□□ -2.31
SCFD1-216ENST00000555550 ADORA1P30542 326 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 REG1BP48304 166 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 CDC34P49427 236 aaPredicted RBP0.63□□□□□ -2.31
SCFD1-216ENST00000555550 AKR1C2P52895 323 aa0.63□□□□□ -2.31
SCFD1-216ENST00000555550 CTAG1AP78358 180 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms