RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 MGAT3Q09327 533 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 C10orf55Q5SWW7 151 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 TEX36Q5VZQ5 186 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 SSX6Q7RTT6 188 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 SPATA12Q7Z6I5 190 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 PLCZ1Q86YW0 608 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 TMEM86AQ8N2M4 240 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 PACRGLQ8N7B6 248 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 DAND5Q8N907 189 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 C12orf29Q8N999 325 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 OR52K2Q8NGK3 314 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 MRAP2Q96G30 205 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 CATSPER2Q96P56 530 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 IMMP2LQ96T52 175 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 SERPINI1Q99574 410 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 TRABDQ9H4I3 376 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 MS4A12Q9NXJ0 267 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 PSME2Q9UL46 239 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 EML5Q05BV3 1969 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 NAV1Q8NEY1 1877 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 TRAV14DV4A0A0A6YYC5 116 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 TRAV38-1A0A0B4J264 116 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 EFCAB9A8MZ26 197 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 H7C2G1 150 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 M0QYV0 167 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 ITGB1BP1O14713 200 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 CREBL2O60519 120 aaPredicted RBP-0.07□□□□□ -2.42
SNX6-204ENST00000555541 NDUFB2O95178 105 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 TRGC1P0CF51 173 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 PSMB8P28062 276 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 CA7P43166 264 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 GABRA2P47869 451 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 DAPP51397 102 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 TPI1P60174 286 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 STK38Q15208 465 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 TTC33Q6PID6 262 aaPredicted RBP-0.07□□□□□ -2.42
SNX6-204ENST00000555541 UMODL1-AS1Q8N2C9 162 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 Q8N6K4 173 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 ZNF565Q8N9K5 539 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 OR2D3Q8NGH3 330 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 OR13C8Q8NGS7 320 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 OBSCN-AS1Q96MR7 158 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 HBEGFQ99075 208 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 SNX10Q9Y5X0 201 aa-0.07□□□□□ -2.42
SNX6-204ENST00000555541 A0A087WX48 190 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 GOLGA6L7A0A1B0GV03 622 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 TMEM212A6NML5 194 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 H3BT86 120 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 GPR171O14626 319 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 PPBPP02775 128 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 LGALS1P09382 135 aaKnown RBP-0.08□□□□□ -2.42
SNX6-204ENST00000555541 CA5AP35218 305 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 ETV1P50549 477 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 RBM11P57052 281 aaKnown RBP-0.08□□□□□ -2.42
SNX6-204ENST00000555541 UBE2KP61086 200 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 VSNL1P62760 191 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 C9orf64Q5T6V5 341 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 OR51H1Q8NH63 302 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 ZNF675Q8TD23 568 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 TESCQ96BS2 214 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 NMNAT3Q96T66 252 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 TTTY13Q9BZ97 58 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 NIT2Q9NQR4 276 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 POLR3HQ9Y535 204 aaPredicted RBP-0.08□□□□□ -2.42
SNX6-204ENST00000555541 SETD5Q9C0A6 1442 aa-0.08□□□□□ -2.42
SNX6-204ENST00000555541 SYNE1Q8NF91 8797 aaKnown RBP-0.08□□□□□ -2.42
SNX6-204ENST00000555541 GLI3P10071 1580 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 TRAV7A0A075B6U4 112 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 MEIS3P1A6NDR6 274 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 MRASO14807 208 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 CRXO43186 299 aaPredicted RBP-0.09□□□□□ -2.42
SNX6-204ENST00000555541 MPZL2O60487 215 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 SNAP29O95721 258 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 MT-CO2P00403 227 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 STAG3L2P0CL84 134 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 CCNOP22674 350 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 HSPA9P38646 679 aaKnown RBP-0.09□□□□□ -2.42
SNX6-204ENST00000555541 FXYD7P58549 80 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 AP1S1P61966 158 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 HIST1H4AP62805 103 aaKnown RBP-0.09□□□□□ -2.42
SNX6-204ENST00000555541 BTN3A2P78410 334 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 C1DQ13901 141 aaKnown RBP-0.09□□□□□ -2.42
SNX6-204ENST00000555541 USF2Q15853 346 aaPredicted RBP-0.09□□□□□ -2.42
SNX6-204ENST00000555541 ATP5L2Q7Z4Y8 100 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 BAP18Q8IXM2 172 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 NATD1Q8N6N6 113 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 OR8B3Q8NGG8 313 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 PATE1Q8WXA2 126 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 TAMM41Q96BW9 452 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 C12orf43Q96C57 262 aaKnown RBP-0.09□□□□□ -2.42
SNX6-204ENST00000555541 ACY3Q96HD9 319 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 SFRP2Q96HF1 295 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 EIF5A2Q9GZV4 153 aaKnown RBP-0.09□□□□□ -2.42
SNX6-204ENST00000555541 TMEM222Q9H0R3 208 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 OR51B6Q9H340 312 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 C10orf95Q9H7T3 257 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 OR5AC2Q9NZP5 309 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 COMMD9Q9P000 198 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 NAT8Q9UHE5 227 aa-0.09□□□□□ -2.42
SNX6-204ENST00000555541 ZFP30Q9Y2G7 519 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms