RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 KRTAP10-11P60412 298 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 ARFRP1Q13795 201 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 IGSF11Q5DX21 431 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 C9orf66Q5T8R8 295 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 HACD4Q5VWC8 232 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 GLDNQ6ZMI3 551 aaPredicted RBP9.22□□□□□ -0.93
VRK1-204ENST00000555351 ATG5Q9H1Y0 275 aa9.22□□□□□ -0.93
VRK1-204ENST00000555351 METTL1Q9UBP6 276 aaKnown RBP9.22□□□□□ -0.93
VRK1-204ENST00000555351 A0A0A6YYH2 397 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 A6NJ64 397 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 M0R1X1 148 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 FCN1O00602 326 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 SLC22A5O76082 557 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 BRI3O95415 125 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 IGKV1-16P04430 117 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 OR8U9P0C7N5 309 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 EGR2P11161 476 aaPredicted RBP9.21□□□□□ -0.94
VRK1-204ENST00000555351 CD40LGP29965 261 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 RPS16P62249 146 aaKnown RBP9.21□□□□□ -0.94
VRK1-204ENST00000555351 DGCR2P98153 550 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 NDPQ00604 133 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 ZNF616Q08AN1 781 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 CBX3Q13185 183 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 CDNFQ49AH0 187 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 SFXN4Q6P4A7 337 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 H1FOOQ8IZA3 346 aaPredicted RBP9.21□□□□□ -0.94
VRK1-204ENST00000555351 DRAXINQ8NBI3 349 aaPredicted RBP9.21□□□□□ -0.94
VRK1-204ENST00000555351 OR11H1Q8NG94 326 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 RBMXL1Q96E39 390 aaKnown RBP9.21□□□□□ -0.94
VRK1-204ENST00000555351 TMEM68Q96MH6 324 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 GINS4Q9BRT9 223 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 OR2D2Q9H210 308 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 KLK15Q9H2R5 256 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 SLA2Q9H6Q3 261 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 SLC35D1Q9NTN3 355 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 SDHAF2Q9NX18 166 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 FBXO7Q9Y3I1 522 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 ETV7Q9Y603 341 aa9.21□□□□□ -0.94
VRK1-204ENST00000555351 A0A0B4J203 849 aa9.2□□□□□ -0.94
VRK1-204ENST00000555351 H3BUA1 57 aa9.2□□□□□ -0.94
VRK1-204ENST00000555351 HOXD3P31249 432 aaPredicted RBP9.2□□□□□ -0.94
VRK1-204ENST00000555351 RTL8BQ17RB0 113 aa9.2□□□□□ -0.94
VRK1-204ENST00000555351 DEFB136Q30KP8 78 aa9.2□□□□□ -0.94
VRK1-204ENST00000555351 TMEM177Q53S58 311 aa9.2□□□□□ -0.94
VRK1-204ENST00000555351 ACTBL2Q562R1 376 aa9.2□□□□□ -0.94
VRK1-204ENST00000555351 PPP1R27Q86WC6 154 aa9.2□□□□□ -0.94
VRK1-204ENST00000555351 OR1N2Q8NGR9 330 aa9.2□□□□□ -0.94
VRK1-204ENST00000555351 ZNF230Q9UIE0 474 aaPredicted RBP9.2□□□□□ -0.94
VRK1-204ENST00000555351 DAPK2Q9UIK4 370 aa9.2□□□□□ -0.94
VRK1-204ENST00000555351 RRP15Q9Y3B9 282 aaKnown RBP9.2□□□□□ -0.94
VRK1-204ENST00000555351 A0A075B6Q4 140 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 A0A1W2PN81 502 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 WI2-2373I1.2A0A1W2PRP0 233 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 SOX15O60248 233 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 CRYGBP07316 175 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 LGALS1P09382 135 aaKnown RBP9.19□□□□□ -0.94
VRK1-204ENST00000555351 SDC2P34741 201 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 CHRNA7P36544 502 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 RAB25P57735 213 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 TIMM50Q3ZCQ8 353 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 ZNF260Q3ZCT1 412 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 CNIH2Q6PI25 160 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 DDB2Q92466 427 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 ARPC1AQ92747 370 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 DUX3Q96PT4 197 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 OR51E2Q9H255 320 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 GNB4Q9HAV0 340 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 RHBDL2Q9NX52 303 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 RBM7Q9Y580 266 aaKnown RBP9.19□□□□□ -0.94
VRK1-204ENST00000555351 DNAH3Q8TD57 4116 aa9.19□□□□□ -0.94
VRK1-204ENST00000555351 SEC14L6B5MCN3 397 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 SLC25A17O43808 307 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 CA2P00918 260 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 IGLV2-23P01705 113 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 HLA-DQB1P01920 261 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 CD36P16671 472 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 DUTP33316 252 aaKnown RBP9.18□□□□□ -0.94
VRK1-204ENST00000555351 FXYD3Q14802 87 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 ECSCRQ19T08 205 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 UNQ5815/PRO19632Q6UWF5 114 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 CROCCP3Q8IVE0 287 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 ZNF645Q8N7E2 425 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 TEX45Q8NA69 505 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 OSR1Q8TAX0 266 aaPredicted RBP9.18□□□□□ -0.94
VRK1-204ENST00000555351 LGALS14Q8TCE9 139 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 ABHD5Q8WTS1 349 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 TPSG1Q9NRR2 321 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 SCOCQ9UIL1 159 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 OR2W1Q9Y3N9 320 aa9.18□□□□□ -0.94
VRK1-204ENST00000555351 IGKV1D-8A0A087WSZ0 117 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 SHOXO15266 292 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 SNRPBP14678 240 aaKnown RBP9.17□□□□□ -0.94
VRK1-204ENST00000555351 LINC00205P59089 165 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 GNG2P59768 71 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 UBE2KP61086 200 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 GNB1P62873 340 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 MSMO1Q15800 293 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 VMA21Q3ZAQ7 101 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 ASPHD1Q5U4P2 390 aa9.17□□□□□ -0.94
VRK1-204ENST00000555351 ZNF429Q86V71 674 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms