RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 FOXL2P58012 376 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 RTP5Q14D33 572 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 SNAI3Q3KNW1 292 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 SLC25A34Q6PIV7 304 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 APOBEC4Q8WW27 367 aaKnown RBP12.01□□□□□ -0.49
VTI1B-204ENST00000554659 HIST1H2BAQ96A08 127 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 RARRES2Q99969 163 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 DDA1Q9BW61 102 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 CBLN4Q9NTU7 201 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 AUP1Q9Y679 476 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 PLXNB2O15031 1838 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 ZP1P60852 638 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 SCARF2Q96GP6 870 aaPredicted RBP12.01□□□□□ -0.49
VTI1B-204ENST00000554659 PPIAL4EA0A075B759 164 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 CEACAM18A8MTB9 384 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 PPIAL4DF5H284 164 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 CDK2AP1O14519 115 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 PPIAL4FP0DN26 164 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 CKS2P33552 79 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 REG1BP48304 166 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 AMMECR1LQ6DCA0 310 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 HIST1H4GQ99525 98 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 CDX2Q99626 313 aaPredicted RBP12.01□□□□□ -0.49
VTI1B-204ENST00000554659 PPIAL4AQ9Y536 164 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 EIF3GO75821 320 aaKnown RBP eCLIP12.01□□□□□ -0.49
VTI1B-204ENST00000554659 RECKO95980 971 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 MMDQ15546 238 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 DIRC2Q96SL1 478 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 PRDM14Q9GZV8 571 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 DLL3Q9NYJ7 618 aa12.01□□□□□ -0.49
VTI1B-204ENST00000554659 COL4A5P29400 1685 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 SH3BGRL3Q9H299 93 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 PRSS2P07478 247 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 HOXD4P09016 255 aaPredicted RBP12□□□□□ -0.49
VTI1B-204ENST00000554659 COX5BP10606 129 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 MPV17P39210 176 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 TPRX1Q8N7U7 411 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 MRPL18Q9H0U6 180 aaKnown RBP12□□□□□ -0.49
VTI1B-204ENST00000554659 DMRT1Q9Y5R6 373 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 LOC390937A0A1W2PQ73 354 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 C16orf97H3BN30 126 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 TNFRSF9Q07011 255 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 LEMD1Q68G75 181 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 TMEM45BQ96B21 275 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 ZNF714Q96N38 554 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 SCN3AQ9NY46 2000 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 MYO16Q9Y6X6 1858 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 GLIPR1P48060 266 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 GFRA1P56159 465 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 P2RY6Q15077 328 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 ECSCRQ19T08 205 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 ZNF362Q5T0B9 420 aaPredicted RBP12□□□□□ -0.49
VTI1B-204ENST00000554659 FAM214BQ7L5A3 538 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 SMIM8Q96KF7 97 aa12□□□□□ -0.49
VTI1B-204ENST00000554659 A0A0G2JK05 382 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 TMEM229AB2RXF0 380 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 CELA2AP08217 269 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 FGF5P12034 268 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 MC5RP33032 325 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 IZUMO4Q1ZYL8 232 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 RNFT1Q5M7Z0 435 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 CCDC144NLQ6NUI1 221 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 OR10S1Q8NGN2 331 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 FAM131CQ96AQ9 280 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 SCNM1Q9BWG6 230 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 LNP1A1A4G5 178 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 DLL1O00548 723 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 CDX4O14627 284 aaPredicted RBP11.99□□□□□ -0.49
VTI1B-204ENST00000554659 THY1P04216 161 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 LINC00869P0C866 280 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 ZNF708P17019 499 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 CRYBA2P53672 197 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 ERVFRD-1P60508 538 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 EGR4Q05215 589 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 CARHSP1Q9Y2V2 147 aaKnown RBP11.99□□□□□ -0.49
VTI1B-204ENST00000554659 RPL27AP46776 148 aaKnown RBP11.99□□□□□ -0.49
VTI1B-204ENST00000554659 A0A1B0GV90 55 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 PQLC2LA1A4F0 135 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 AGAP20933 346 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 UNC119Q13432 240 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 C19orf54Q5BKX5 351 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 METTL1Q9UBP6 276 aaKnown RBP11.99□□□□□ -0.49
VTI1B-204ENST00000554659 HSPB7Q9UBY9 170 aa11.99□□□□□ -0.49
VTI1B-204ENST00000554659 PTPRFP10586 1907 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 RNASE1P07998 156 aaKnown RBP11.98□□□□□ -0.49
VTI1B-204ENST00000554659 ID4P47928 161 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 C2orf83Q53S99 150 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 STRCP1A6NGW2 1772 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 PLAUP00749 431 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 MIC13Q5XKP0 118 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 CALHM1Q8IU99 346 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 GUCD1Q96NT3 240 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 WFIKKN1Q96NZ8 548 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 PSMG3Q9BT73 122 aaPredicted RBP11.98□□□□□ -0.49
VTI1B-204ENST00000554659 ATAD5Q96QE3 1844 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 NPIPB9F8W1W9 429 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 AMY1AP04745 511 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 C10orf128Q5T292 105 aa11.98□□□□□ -0.49
VTI1B-204ENST00000554659 F11RQ9Y624 299 aaKnown RBP11.98□□□□□ -0.49
VTI1B-204ENST00000554659 HOXB1P14653 301 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms