RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 RCC1P18754 421 aaPredicted RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 GZMHP20718 246 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 CHATP28329 748 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 CEACAM3P40198 252 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 MAP2K4P45985 399 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 REG1BP48304 166 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 RPS27AP62979 156 aaKnown RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 MLLT11Q13015 90 aaPredicted RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 GPR50Q13585 617 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 EBI3Q14213 229 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 GNMTQ14749 295 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 MED22Q15528 200 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 HMGN3Q15651 99 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 TBCEQ15813 527 aaPredicted RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 SSX1Q16384 188 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 TMEM30BQ3MIR4 351 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 HSD17B12Q53GQ0 312 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 CT45A1Q5HYN5 189 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 RBM48Q5RL73 367 aaKnown RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 C6orf183Q5T699 404 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 KPRPQ5T749 579 aaPredicted RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 SYT6Q5T7P8 510 aaPredicted RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 LIPKQ5VXJ0 399 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 OR10K2Q6IF99 312 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 ZNF880Q6PDB4 577 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 IZUMO2Q6UXV1 221 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 TMEM91Q6ZNR0 172 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 SLC25A48Q6ZT89 311 aaKnown RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 PRSS48Q7RTY5 328 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 CEACAM19Q7Z692 300 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 C5orf24Q7Z6I8 188 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 MS4A15Q8N5U1 240 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 ZNF114Q8NC26 417 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 OR10V1Q8NGI7 309 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 OR10X1Q8NGY0 326 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 OR1L1Q8NH94 360 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 CT45A3Q8NHU0 189 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 NEK7Q8TDX7 302 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 UFD1Q92890 307 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 TMEM203Q969S6 136 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 FAM46BQ96A09 425 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 RBMXL1Q96E39 390 aaKnown RBP3.26□□□□□ -1.89
VTI1B-203ENST00000554636 AKR1E2Q96JD6 320 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 SULT4A1Q9BR01 284 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 NICN1Q9BSH3 213 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 TMEM59Q9BXS4 323 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 SELENOIQ9C0D9 397 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 CST11Q9H112 138 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 ISYNA1Q9NPH2 558 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 SCN3BQ9NY72 215 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 GHRLQ9UBU3 117 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 JPT1Q9UK76 154 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 TRAPPC2LQ9UL33 140 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 TPRKBQ9Y3C4 175 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 PEX16Q9Y5Y5 336 aa3.26□□□□□ -1.89
VTI1B-203ENST00000554636 TRBV6-6A0A0A6YYG2 114 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 TCRBV4S1A1TA0A5B7 111 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 ZNF736B4DX44 427 aaPredicted RBP3.25□□□□□ -1.89
VTI1B-203ENST00000554636 SLC17A2O00624 439 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 LDLRAD4O15165 306 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 LANCL1O43813 399 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 PEX14O75381 377 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 CA11O75493 328 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 NAPSAO96009 420 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 HSMCR30P0CW71 290 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 TMEM11P17152 192 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 SRMP19623 302 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 EDN2P20800 178 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 FUT3P21217 361 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 PSMA1P25786 263 aaKnown RBP3.25□□□□□ -1.89
VTI1B-203ENST00000554636 IL3RAP26951 378 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 HTR2CP28335 458 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 HSPA13P48723 471 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 FABP5Q01469 135 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 HES1Q14469 280 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 TRAM1Q15629 374 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 C9orf152Q5JTZ5 239 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 GLT8D1Q68CQ7 371 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 TRAT1Q6PIZ9 186 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 OR2W3Q7Z3T1 314 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 C6orf201Q7Z4U5 140 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 MOB3BQ86TA1 216 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 ZNF554Q86TJ5 538 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 ODF3L1Q8IXM7 274 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 Q8N9W7 124 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 OR4F17Q8NGA8 305 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 OR5AU1Q8NGC0 362 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 OR6M1Q8NGM8 313 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 SECTM1Q8WVN6 248 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 RTN4IP1Q8WWV3 396 aaPredicted RBP3.25□□□□□ -1.89
VTI1B-203ENST00000554636 CNBD2Q96M20 576 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 NOL4LQ96MY1 436 aaPredicted RBP3.25□□□□□ -1.89
VTI1B-203ENST00000554636 OR4F4Q96R69 305 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 HDHD3Q9BSH5 251 aaPredicted RBP3.25□□□□□ -1.89
VTI1B-203ENST00000554636 LPAR5Q9H1C0 372 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 IFI27L2Q9H2X8 130 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 VCX3BQ9H321 246 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 TAF9BQ9HBM6 251 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 RAB9BQ9NP90 201 aa3.25□□□□□ -1.89
VTI1B-203ENST00000554636 PLSCR3Q9NRY6 295 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms