RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 LINC00518Q8N0U6 118 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 WDSUB1Q8N9V3 476 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 CCDC71LQ8N9Z2 235 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 TMEM229BQ8NBD8 167 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 OR5L2Q8NGL0 311 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 OR6N1Q8NGY5 312 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 OR6X1Q8NH79 312 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 PTX4Q96A99 478 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 SDSLQ96GA7 329 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 SLC25A44Q96H78 314 aaPredicted RBP4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 IMMP1LQ96LU5 166 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 DCTN5Q9BTE1 182 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 EMC6Q9BV81 110 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 ACTR3CQ9C0K3 210 aaPredicted RBP4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 CHST6Q9GZX3 395 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 METTL17Q9H7H0 456 aaPredicted RBP4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 PROK2Q9HC23 129 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 SH2D2AQ9NP31 389 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 ASF1BQ9NVP2 202 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 TAS2R8Q9NYW2 309 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 CYB5R1Q9UHQ9 305 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 MRPS28Q9Y2Q9 187 aaKnown RBP4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 LHFPL6Q9Y693 200 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 CHCHD2Q9Y6H1 151 aaPredicted RBP4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 U3KQ87 197 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 GTF3C1Q12789 2109 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 NCOA6Q14686 2063 aaPredicted RBP4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 NCKAP5O14513 1909 aa4.25□□□□□ -1.73
MTHFD1-206ENST00000554353 TMEM269A0A1B0GVZ9 245 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 PSMB11A5LHX3 300 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 MEIS3P1A6NDR6 274 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 SGCEO43556 437 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 SNAPINO95295 136 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 CLDN1O95832 211 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 CA1P00915 261 aaPredicted RBP4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 CD74P04233 296 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 CD3DP04234 171 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 CD2P06729 351 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 UMODP07911 640 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 GTF2F2P13984 249 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 HLA-GP17693 338 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 CXCL2P19875 107 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 GLRA1P23415 457 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 ZNF133P52736 654 aaPredicted RBP4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 SPCS3P61009 180 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 UBE2MP61081 183 aaKnown RBP4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 ERVK11-1P61568 191 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 H3F3AP84243 136 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 UNC119Q13432 240 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 RBM39Q14498 530 aaKnown RBP4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 ATP6V1FQ16864 119 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 SOHLH1Q5JUK2 328 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 STEAP1BQ6NZ63 245 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 IGFL3Q6UXB1 125 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 C3P1Q6ZMU1 363 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 OR5AS1Q8N127 324 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 TMEM251Q8N6I4 163 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 NOXO1Q8NFA2 376 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 OR51S1Q8NGJ8 323 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 OR1B1Q8NGR6 318 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 OR2Y1Q8NGV0 311 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 OR2T35Q8NGX2 323 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 AQP3Q92482 292 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 FGGYQ96C11 551 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 SLAMF6Q96DU3 332 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 ADAT3Q96EY9 351 aaPredicted RBP4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 OXGR1Q96P68 337 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 IP6K3Q96PC2 410 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 RBP7Q96R05 134 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 ATP5SQ99766 215 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 PRRT1Q99946 306 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 DEFB126Q9BYW3 111 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 PBOV1Q9GZY1 135 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 ALX4Q9H161 411 aaPredicted RBP4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 ATG5Q9H1Y0 275 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 MYOZ1Q9NP98 299 aaPredicted RBP4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 CKLFQ9UBR5 152 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 ZNF107Q9UII5 783 aaPredicted RBP4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 RAB22AQ9UL26 194 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 PKDREJQ9NTG1 2253 aa4.24□□□□□ -1.73
MTHFD1-206ENST00000554353 ANKRD17O75179 2603 aaKnown RBP4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 IGHV1-45A0A0A0MS14 117 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 NSG1A0A0A6YYJ2 146 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 A0A1B0GUS0 222 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 C5orf63A6NC05 138 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 TMEM235A6NFC5 223 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 SLC22A20A6NK97 555 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 PMS2P5A8MQ11 134 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 TMEM14DPA8MWL7 114 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 MCRIP1C9JLW8 97 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 CREBL2O60519 120 aaPredicted RBP4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 TOXO94900 526 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 SIX6O95475 246 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 IGLV3-1P01715 115 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 IGHG1P01857 330 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 IGHV4-31P0DP07 118 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 COX5BP10606 129 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 COX6A1P12074 109 aa4.23□□□□□ -1.73
MTHFD1-206ENST00000554353 GATA1P15976 413 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms