RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 IGKV1-9A0A0C4DH69 117 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 C9orf170A2RU37 121 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 TMEM235A6NFC5 223 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 LRRC30A6NM36 301 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 IFNL4K9M1U5 179 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 MFNGO00587 321 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 RER1O15258 196 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 COX5BP10606 129 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 PAX6P26367 422 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 CD34P28906 385 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 NPY4RP50391 375 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 PRKXP51817 358 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 DLX1P56177 255 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 TMEM50BP56557 158 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 NANOS2P60321 138 aaKnown RBP4.47□□□□□ -1.69
ATXN3-226ENST00000554350 DHRS2Q13268 280 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 RBMY1FQ15415 496 aaKnown RBP4.47□□□□□ -1.69
ATXN3-226ENST00000554350 KISS1Q15726 138 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 RSPO1Q2MKA7 263 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-226ENST00000554350 MOGAT2Q3SYC2 334 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 LY6G6FQ5SQ64 297 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 TMEM42Q69YG0 159 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 FAAP20Q6NZ36 180 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 GSG1LQ6UXU4 331 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 UNQ6126/PRO20091Q6UXV3 157 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 TMUB2Q71RG4 321 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 HSD17B13Q7Z5P4 300 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-226ENST00000554350 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-226ENST00000554350 TRAPPC6BQ86SZ2 158 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 LHFPL1Q86WI0 220 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 SKA3Q8IX90 412 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 OR8H3Q8N146 312 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 KCNRGQ8N5I3 272 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 OR13C9Q8NGT0 318 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 WIPF2Q8TF74 440 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-226ENST00000554350 RAB3CQ96E17 227 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 PGAM5Q96HS1 289 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 TMEM59Q9BXS4 323 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 NMES1Q9C002 83 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 SELENOIQ9C0D9 397 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 CHST6Q9GZX3 395 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 MFFQ9GZY8 342 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 IFT46Q9NQC8 304 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 IL36GQ9NZH8 169 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 COMMD9Q9P000 198 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 GLS2Q9UI32 602 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 GPR132Q9UNW8 380 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 ZNF256Q9Y2P7 627 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-226ENST00000554350 KCNK7Q9Y2U2 307 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 TIMM10BQ9Y5J6 103 aa4.47□□□□□ -1.69
ATXN3-226ENST00000554350 RNF222A6NCQ9 220 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A10PA6NDY2 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A18PA6NE21 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A16PA6NEW6 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 OR6C6A6NF89 314 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 OR5H14A6NHG9 310 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A20PA6NIJ5 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A8PA6NJQ4 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A7PA6NKC0 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A22PA8MWA6 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A12PA8MX19 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A5PA8MXJ8 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A23PA8MXZ1 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 KRBOX1C9JBD0 128 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 M0R135 149 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 GOSR2O14653 212 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 ADAM20O43506 726 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 SSX5O60225 188 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 TSC22D2O75157 780 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FARS2O95363 451 aaKnown RBP4.46□□□□□ -1.7
ATXN3-226ENST00000554350 CFDP00746 253 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-226ENST00000554350 HLA-AP01891 365 aaKnown RBP4.46□□□□□ -1.7
ATXN3-226ENST00000554350 HCKP08631 526 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A15PP0C7V4 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A13PP0C7W8 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A14PP0C7W9 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM90A24PP0C7X0 464 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 IRF2P14316 349 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 DTYMKP23919 212 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 CDAP32320 146 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 THBS3P49746 956 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 PPP1CBP62140 327 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 CNN3Q15417 329 aaKnown RBP4.46□□□□□ -1.7
ATXN3-226ENST00000554350 SGCAQ16586 387 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 C9orf66Q5T8R8 295 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 OR10K2Q6IF99 312 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 ZNF841Q6ZN19 808 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 COLCA1Q6ZS62 124 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 ACOT7LQ6ZUV0 252 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 FAM57BQ71RH2 274 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 DPPA2Q7Z7J5 298 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 ZNF546Q86UE3 836 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 MOGAT3Q86VF5 341 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 TMEM219Q86XT9 240 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 C1orf87Q8N0U7 546 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 CHST4Q8NCG5 386 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 PXT1Q8NFP0 134 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 OR5AP2Q8NGF4 316 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 OR52B4Q8NGK2 314 aa4.46□□□□□ -1.7
ATXN3-226ENST00000554350 OR8S1Q8NH09 359 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms