RNA–Protein interactions for RNA: ENST00000554244.5

RAD51B-219, Transcript of RAD51 paralog B, human

TSL 3

Gene RAD51B, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-219	ENST00000554244	DMD	P11532	3685 aa		4.9	□□□□□ -1.62
RAD51B-219	ENST00000554244	PRRC2C	Q9Y520	2896 aa	Known RBP	4.9	□□□□□ -1.62
RAD51B-219	ENST00000554244	GVINP1	Q7Z2Y8	2422 aa		4.9	□□□□□ -1.62
RAD51B-219	ENST00000554244	IGKV1D-17	A0A075B6S4	117 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	LOC102723971	A0A1B0GUV8	181 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244		A0A1B0GV50	99 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	ODAM	A1E959	279 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	LRRC30	A6NM36	301 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	COLCA2	A8K830	154 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	C17orf98	A8MV24	154 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244		M0R1B8	84 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	F2RL2	O00254	374 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	CLDN1	O95832	211 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	CRYAA	P02489	173 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	HSPB1	P04792	205 aa	Known RBP	4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	SNRNP70	P08621	437 aa	Known RBP	4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	SRP19	P09132	144 aa	Known RBP	4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	OR13C7	P0DN81	318 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	PRDX2	P32119	198 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	G6PC	P35575	357 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	NBL1	P41271	181 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	UBE2K	P61086	200 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	CCL20	P78556	96 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	SERF2	P84101	59 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	HOXA4	Q00056	320 aa	Predicted RBP	4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	ZNF816	Q0VGE8	651 aa	Predicted RBP	4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	EDDM3A	Q14507	147 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	ICAM4	Q14773	271 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	AKIRIN2	Q53H80	203 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	KHDC3L	Q587J8	217 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	SPANXN5	Q5MJ07	72 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	LRP11	Q86VZ4	500 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	THNSL2	Q86YJ6	484 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	FGFRL1	Q8N441	504 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	GCSAM	Q8N6F7	178 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	OR10G4	Q8NGN3	311 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	FAM57A	Q8TBR7	257 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	FAM222B	Q8WU58	562 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	ITLN1	Q8WWA0	313 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	MBD3L1	Q8WWY6	194 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	HIST1H2BA	Q96A08	127 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	MUCL1	Q96DR8	90 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	C14orf79	Q96F83	325 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	CIB3	Q96Q77	187 aa	Predicted RBP	4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	OR4C12	Q96R67	309 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	RSG1	Q9BU20	258 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	TMEM147	Q9BVK8	224 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	WDR61	Q9GZS3	305 aa	Known RBP	4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	UNKL	Q9H9P5	680 aa	Known RBP	4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	RPS10P5	Q9NQ39	176 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	MLX	Q9UH92	298 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	DUSP13	Q9UII6	198 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	PSG11	Q9UQ72	335 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	PKDREJ	Q9NTG1	2253 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	PTPRQ	Q9UMZ3	2332 aa		4.9	□□□□□ -1.63
RAD51B-219	ENST00000554244	ROS1	P08922	2347 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	NAV3	Q8IVL0	2385 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	IGHV3-43	A0A0B4J1X8	118 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	UBE2L5P	A0A1B0GUS4	154 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	MEX3A	A1L020	520 aa	Known RBP	4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	FAM90A9P	A6NNJ1	464 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	LINC00473	A8K010	186 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244		M0R036	132 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	ITGB1BP1	O14713	200 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	RBFOX2	O43251	390 aa	Known RBP eCLIP	4.89	□□□□□ -1.63	3e-7	■■■□□ 18
RAD51B-219	ENST00000554244	YPEL1	O60688	119 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	RAMP3	O60896	148 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	TSPAN9	O75954	239 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	LY86	O95711	162 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	CRYBA1	P05813	215 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	RNASE1	P07998	156 aa	Known RBP	4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	IGHV3-43D	P0DP04	118 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	GZMH	P20718	246 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	KIR2DS2	P43631	304 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	GPR12	P47775	334 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	RAB13	P51153	203 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	BRWD1-AS2	P59051	145 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	HAGH	Q16775	308 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	ATP6V1F	Q16864	119 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	RNF212	Q495C1	297 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	AARD	Q4LEZ3	155 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	KRTCAP3	Q53RY4	240 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	TMEM41B	Q5BJD5	291 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	OR2B11	Q5JQS5	317 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	SOHLH1	Q5JUK2	328 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	FAM180A	Q6UWF9	173 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	BTNL3	Q6UXE8	466 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	ETV3L	Q6ZN32	361 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	H2BFWT	Q7Z2G1	175 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	MOGAT3	Q86VF5	341 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	RPRML	Q8N4K4	120 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	TPRX1	Q8N7U7	411 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	CLDND2	Q8NHS1	167 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	CD300LF	Q8TDQ1	290 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	SFT2D1	Q8WV19	159 aa		4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	TAF15	Q92804	592 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
RAD51B-219	ENST00000554244	PINX1	Q96BK5	328 aa	Known RBP	4.89	□□□□□ -1.63

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