RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 WSB1Q9Y6I7 421 aa8□□□□□ -1.13
HNRNPC-208ENST00000553753 TGP01266 2768 aa8□□□□□ -1.13
HNRNPC-208ENST00000553753 G3V318 75 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 FCN1O00602 326 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 NFYAP23511 347 aaPredicted RBP7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 PSMB8P28062 276 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 PPIFP30405 207 aaKnown RBP7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 CDX1P47902 265 aaPredicted RBP7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 THBS3P49746 956 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 NCS1P62166 190 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 CX3CL1P78423 397 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 TAGLNQ01995 201 aaKnown RBP7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 PSG5Q15238 335 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 BEAN1Q3B7T3 259 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 PDLIM3Q53GG5 364 aaPredicted RBP7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 KPRPQ5T749 579 aaPredicted RBP7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 ZNF660Q6AZW8 331 aaPredicted RBP7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 LCNL1Q6ZST4 164 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 C18orf65Q6ZTR6 163 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 SLC25A46Q96AG3 418 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 AUNIPQ9H7T9 357 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 METTL1Q9UBP6 276 aaKnown RBP7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 OR2W1Q9Y3N9 320 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 TRAV41A0A0B4J266 112 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 J3QRK9 145 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 XRCC3O43542 346 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 SPDEFO95238 335 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 HLA-DQB1P01920 261 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 IGLL1P15814 213 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 LGALS7P47929 136 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 LUMP51884 338 aaPredicted RBP7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 VBP1P61758 197 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 UBE2NLQ5JXB2 153 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 ZNF562Q6V9R5 426 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 GVQW1Q8N7I0 195 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 SAMD12Q8N8I0 201 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 BEST4Q8NFU0 473 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 KCTD12Q96CX2 325 aaKnown RBP7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 C5orf30Q96GV9 206 aa7.99□□□□□ -1.13
HNRNPC-208ENST00000553753 SLC25A17O43808 307 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 SLC22A5O76082 557 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 IGLV1-40P01703 118 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 SMIM18P0DKX4 95 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 PTHLHP12272 177 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 DUTP33316 252 aaKnown RBP7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 ARPC4P59998 168 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 NDPQ00604 133 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 CBX3Q13185 183 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 RTL8BQ17RB0 113 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 TMEM65Q6PI78 240 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 ETV3LQ6ZN32 361 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 HOGA1Q86XE5 327 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 MRPL41Q8IXM3 137 aaKnown RBP7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 ZNF645Q8N7E2 425 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 LINC00482Q8N8I6 264 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 MINDY2Q8NBR6 621 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 ADTRPQ96IZ2 230 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 CLCC1Q96S66 551 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 FBXO7Q9Y3I1 522 aa7.98□□□□□ -1.13
HNRNPC-208ENST00000553753 LINC00473A8K010 186 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 SHOXO15266 292 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 DUS4LO95620 317 aaKnown RBP7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 CA2P00918 260 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 RRASP10301 218 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 EGR2P11161 476 aaPredicted RBP7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 MYCNOSP40205 109 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 CRIP2P52943 208 aaPredicted RBP7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 TMEM267Q0VDI3 215 aaPredicted RBP7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 ECSCRQ19T08 205 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 TMEM177Q53S58 311 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 TMEM69Q5SWH9 247 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 PPP1R27Q86WC6 154 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 TCTEX1D1Q8N7M0 179 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 BVESQ8NE79 360 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 ABHD5Q8WTS1 349 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 DDB2Q92466 427 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 RCC1LQ96I51 464 aaKnown RBP7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 HARBI1Q96MB7 349 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 P2RX4Q99571 388 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 KLK15Q9H2R5 256 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 NUBP2Q9Y5Y2 271 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 DNAH3Q8TD57 4116 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 IGKV1D-13A0A0B4J2D9 117 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 A0A1W2PN81 502 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 CCL24O00175 119 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 TUSC2O75896 110 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 IGLV2-14P01704 120 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 IGLV2-23P01705 113 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 IGKV1-13P0DP09 117 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 CHRNA7P36544 502 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 CBX5P45973 191 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 RAB9AP51151 201 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 AKIRIN2Q53H80 203 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 C19orf54Q5BKX5 351 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 ANKRD13BQ86YJ7 626 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 MYOZ3Q8TDC0 251 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 RAX2Q96IS3 184 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 UBE2E2Q96LR5 201 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 DUX3Q96PT4 197 aa7.97□□□□□ -1.13
HNRNPC-208ENST00000553753 FAM103A1Q9BTL3 118 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms