RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-223	ENST00000553686	AGK	Q53H12	422 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	ZNF343	Q6P1L6	599 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	TRPM8	Q7Z2W7	1104 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	ERI1	Q8IV48	349 aa	Known RBP	4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	POC5	Q8NA72	575 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	LFNG	Q8NES3	379 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	NPB	Q8NG41	125 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	OR52M1	Q8NGK5	317 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	THEM6	Q8WUY1	208 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	ZNRF4	Q8WWF5	429 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	GALNT14	Q96FL9	552 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	LINC00479	Q96M42	142 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	RDH12	Q96NR8	316 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	OR52B2	Q96RD2	323 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	CHMP1A	Q9HD42	196 aa	Predicted RBP	4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	GPR84	Q9NQS5	396 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	GSTK1	Q9Y2Q3	226 aa		4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	FAM32A	Q9Y421	112 aa	Known RBP	4.19	□□□□□ -1.74
ATXN3-223	ENST00000553686	FAT1	Q14517	4588 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	C2orf70	A6NJV1	201 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	DHRS7C	A6NNS2	312 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	DEGS1	O15121	323 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	ANGPT2	O15123	496 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	TGOLN2	O43493	480 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	SERPINA3	P01011	423 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	SPI1	P17947	270 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	IFNGR2	P38484	337 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	GZMM	P51124	257 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	SNU13	P55769	128 aa	Known RBP	4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	ADARB1	P78563	741 aa	Known RBP	4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	CYLC2	Q14093	348 aa	Predicted RBP	4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	WHAMMP3	Q1A5X7	153 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686		Q3ZCU0	254 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	IFI44L	Q53G44	452 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	ZNF562	Q6V9R5	426 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	SLC25A48	Q6ZT89	311 aa	Known RBP	4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	ZNF554	Q86TJ5	538 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	TMEM61	Q8N0U2	210 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	C6orf223	Q8N319	242 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	SLC37A3	Q8NCC5	494 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	OR1L6	Q8NGR2	347 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	BORCS8	Q96FH0	119 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	COQ2	Q96H96	371 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	SGK494	Q96LW2	274 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	TEAD3	Q99594	435 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	PBOV1	Q9GZY1	135 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	RHOF	Q9HBH0	211 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	HMG20A	Q9NP66	347 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	RBFOX1	Q9NWB1	397 aa	Known RBP	4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	CACNG5	Q9UF02	275 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	RPL36	Q9Y3U8	105 aa	Known RBP	4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	PYGO1	Q9Y3Y4	419 aa		4.18	□□□□□ -1.74
ATXN3-223	ENST00000553686	DEFB131B	A0A096LNP1	70 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	PRR32	B1ATL7	298 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	DEFB4A	O15263	64 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	LANCL1	O43813	399 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	GATB	O75879	557 aa	Known RBP	4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	NDUFA3	O95167	84 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	CD74	P04233	296 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	GYPB	P06028	91 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	RPL35A	P18077	110 aa	Known RBP	4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	CBLN1	P23435	193 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	NPY1R	P25929	384 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	FCGR2B	P31994	310 aa	Predicted RBP	4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	VHL	P40337	213 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	ZNF137P	P52743	207 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	ATP1B3	P54709	279 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	SMIM11A	P58511	58 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	NDP	Q00604	133 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	IFFO1	Q0D2I5	559 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	ATXN7L3	Q14CW9	347 aa	Predicted RBP	4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	FAM98B	Q52LJ0	330 aa	Known RBP	4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	RPL13AP3	Q6NVV1	102 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	DEGS2	Q6QHC5	323 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	C16orf54	Q6UWD8	224 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	ASCL4	Q6XD76	172 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	ZNF383	Q8NA42	475 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	OR51T1	Q8NGJ9	327 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	OTOS	Q8NHW6	89 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	SAT2	Q96F10	170 aa	Predicted RBP	4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	NSL1	Q96IY1	281 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	PRAC1	Q96KF2	57 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	AMELY	Q99218	206 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	OPRPN	Q99935	248 aa	Predicted RBP	4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	COMMD4	Q9H0A8	199 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	LGALS13	Q9UHV8	139 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	KIF25	Q9UIL4	384 aa		4.17	□□□□□ -1.74
ATXN3-223	ENST00000553686	SLC33A1	O00400	549 aa	Predicted RBP	4.16	□□□□□ -1.74
ATXN3-223	ENST00000553686	SDCBP	O00560	298 aa	Predicted RBP	4.16	□□□□□ -1.74
ATXN3-223	ENST00000553686	IFNG	P01579	166 aa		4.16	□□□□□ -1.74
ATXN3-223	ENST00000553686	IGLV3-1	P01715	115 aa		4.16	□□□□□ -1.74
ATXN3-223	ENST00000553686	TRBV12-3	P01733	135 aa		4.16	□□□□□ -1.74
ATXN3-223	ENST00000553686	CALCB	P10092	127 aa		4.16	□□□□□ -1.74
ATXN3-223	ENST00000553686	BCL3	P20749	454 aa		4.16	□□□□□ -1.74
ATXN3-223	ENST00000553686	LGALS7	P47929	136 aa		4.16	□□□□□ -1.74
ATXN3-223	ENST00000553686	KCNJ3	P48549	501 aa		4.16	□□□□□ -1.74
ATXN3-223	ENST00000553686	RBP2	P50120	134 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms