RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 VSIG4Q9Y279 399 aa10.1□□□□□ -0.79
ACTN1-207ENST00000553290 NUBP2Q9Y5Y2 271 aa10.1□□□□□ -0.79
ACTN1-207ENST00000553290 I3L521 148 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 IGKV1-16P04430 117 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 DTYMKP23919 212 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 LINC00205P59089 165 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 TAGLNQ01995 201 aaKnown RBP10.09□□□□□ -0.79
ACTN1-207ENST00000553290 CBX3Q13185 183 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 FHL3Q13643 280 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 ECSCRQ19T08 205 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 C19orf54Q5BKX5 351 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 PYHIN1Q6K0P9 492 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 SFXN4Q6P4A7 337 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 ZNF562Q6V9R5 426 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 OR11H1Q8NG94 326 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 ABHD5Q8WTS1 349 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 OR51E2Q9H255 320 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 GNB4Q9HAV0 340 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 SLC35D1Q9NTN3 355 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 SDHAF2Q9NX18 166 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 DAPK2Q9UIK4 370 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 FOXA2Q9Y261 457 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-207ENST00000553290 RRP15Q9Y3B9 282 aaKnown RBP10.09□□□□□ -0.79
ACTN1-207ENST00000553290 FBXO7Q9Y3I1 522 aa10.09□□□□□ -0.79
ACTN1-207ENST00000553290 RBM7Q9Y580 266 aaKnown RBP10.09□□□□□ -0.79
ACTN1-207ENST00000553290 A0A1W2PN81 502 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 WI2-2373I1.2A0A1W2PRP0 233 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 OR8U8P0C7N1 319 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 EGR2P11161 476 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-207ENST00000553290 CHRNA7P36544 502 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 LGALS7P47929 136 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 SCAND1P57086 179 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 PITPNAQ00169 270 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 KCTD21Q4G0X4 260 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 AKIRIN2Q53H80 203 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 C9orf66Q5T8R8 295 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 HACD4Q5VWC8 232 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 PPP1R27Q86WC6 154 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 OR1N2Q8NGR9 330 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 CLCC1Q96S66 551 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 DCSTAMPQ9H295 470 aa10.08□□□□□ -0.8
ACTN1-207ENST00000553290 SLC25A17O43808 307 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 RAMP3O60896 148 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 CA2P00918 260 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 CTXN2P0C2S0 81 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 RRASP10301 218 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 SNRPBP14678 240 aaKnown RBP10.07□□□□□ -0.8
ACTN1-207ENST00000553290 CD40LGP29965 261 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 SDC2P34741 201 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 DGCR2P98153 550 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 ZNF616Q08AN1 781 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 DCTN2Q13561 401 aaKnown RBP10.07□□□□□ -0.8
ACTN1-207ENST00000553290 ACTBL2Q562R1 376 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 DEFB121Q5J5C9 76 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 UNQ5815/PRO19632Q6UWF5 114 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 H1FOOQ8IZA3 346 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-207ENST00000553290 ADTRPQ96IZ2 230 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 ST6GALNAC5Q9BVH7 336 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 ELF5Q9UKW6 265 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-207ENST00000553290 A3GALT2U3KPV4 340 aa10.07□□□□□ -0.8
ACTN1-207ENST00000553290 IGKV1D-8A0A087WSZ0 117 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 SEC14L6B5MCN3 397 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 SOX15O60248 233 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 CD36P16671 472 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 GNG2P59768 71 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 GNB1P62873 340 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 MXD1Q05195 221 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 FXYD3Q14802 87 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 NEDD8Q15843 81 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 RTL8BQ17RB0 113 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 TMEM177Q53S58 311 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 LFNGQ8NES3 379 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 LGALS14Q8TCE9 139 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 HARBI1Q96MB7 349 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 FAM103A1Q9BTL3 118 aaKnown RBP10.06□□□□□ -0.8
ACTN1-207ENST00000553290 RHBDL2Q9NX52 303 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 ETV7Q9Y603 341 aa10.06□□□□□ -0.8
ACTN1-207ENST00000553290 LOC100506127A0A0U1RQW1 187 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 TMEM235A6NFC5 223 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 SHOXO15266 292 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 TMEM127O75204 238 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 CNIH1O95406 144 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 IGLV2-23P01705 113 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 LGALS1P09382 135 aaKnown RBP10.05□□□□□ -0.8
ACTN1-207ENST00000553290 INSL3P51460 131 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 LUMP51884 338 aaPredicted RBP10.05□□□□□ -0.8
ACTN1-207ENST00000553290 ZNF260Q3ZCT1 412 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 CNIH2Q6PI25 160 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 BVESQ8NE79 360 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 NUDCD2Q8WVJ2 157 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 C5orf30Q96GV9 206 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 OR5B12Q96R08 314 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 SLA2Q9H6Q3 261 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 TPSG1Q9NRR2 321 aa10.05□□□□□ -0.8
ACTN1-207ENST00000553290 A0A0A6YYH2 397 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 A6NJ64 397 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 ARPC1BO15143 372 aaKnown RBP10.04□□□□□ -0.8
ACTN1-207ENST00000553290 SLC22A5O76082 557 aa10.04□□□□□ -0.8
ACTN1-207ENST00000553290 CRYGBP07316 175 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms