RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 OR4A4PQ8NGN8 299 aa12.37□□□□□ -0.43
CDK4-215ENST00000553237 OR5H6Q8NGV6 325 aa12.37□□□□□ -0.43
CDK4-215ENST00000553237 MYOZ3Q8TDC0 251 aa12.37□□□□□ -0.43
CDK4-215ENST00000553237 UBE2E2Q96LR5 201 aa12.37□□□□□ -0.43
CDK4-215ENST00000553237 FUNDC2Q9BWH2 189 aa12.37□□□□□ -0.43
CDK4-215ENST00000553237 ELF5Q9UKW6 265 aaPredicted RBP12.37□□□□□ -0.43
CDK4-215ENST00000553237 GAB2Q9UQC2 676 aa12.37□□□□□ -0.43
CDK4-215ENST00000553237 VSIG4Q9Y279 399 aa12.37□□□□□ -0.43
CDK4-215ENST00000553237 A0A1W2PN81 502 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 SEC14L6B5MCN3 397 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 M0R1X1 148 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 SOX15O60248 233 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 RBBP9O75884 186 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 IGKV1-16P04430 117 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 TFAP2AP05549 437 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 OR8U9P0C7N5 309 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 CHRNA7P36544 502 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 TALDO1P37837 337 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 RPS19P39019 145 aaKnown RBP12.36□□□□□ -0.43
CDK4-215ENST00000553237 RPS16P62249 146 aaKnown RBP12.36□□□□□ -0.43
CDK4-215ENST00000553237 DGCR2P98153 550 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 ARFRP1Q13795 201 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 ARL6IP1Q15041 203 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 PSG5Q15238 335 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 MINDY2Q8NBR6 621 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 OR1N2Q8NGR9 330 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 OR13F1Q8NGS4 319 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 FAM103A1Q9BTL3 118 aaKnown RBP12.36□□□□□ -0.43
CDK4-215ENST00000553237 RHBDL2Q9NX52 303 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 METTL1Q9UBP6 276 aaKnown RBP12.36□□□□□ -0.43
CDK4-215ENST00000553237 ETV7Q9Y603 341 aa12.36□□□□□ -0.43
CDK4-215ENST00000553237 I3L521 148 aa12.35□□□□□ -0.43
CDK4-215ENST00000553237 EGR2P11161 476 aaPredicted RBP12.35□□□□□ -0.43
CDK4-215ENST00000553237 SERPINB10P48595 397 aa12.35□□□□□ -0.43
CDK4-215ENST00000553237 SCAND1P57086 179 aa12.35□□□□□ -0.43
CDK4-215ENST00000553237 GNB1P62873 340 aa12.35□□□□□ -0.43
CDK4-215ENST00000553237 C9orf66Q5T8R8 295 aa12.35□□□□□ -0.43
CDK4-215ENST00000553237 OR10J5Q8NHC4 309 aa12.35□□□□□ -0.43
CDK4-215ENST00000553237 SLC25A38Q96DW6 304 aa12.35□□□□□ -0.43
CDK4-215ENST00000553237 RNF5Q99942 180 aa12.35□□□□□ -0.43
CDK4-215ENST00000553237 ALX4Q9H161 411 aaPredicted RBP12.35□□□□□ -0.43
CDK4-215ENST00000553237 SCGNO76038 276 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 CA2P00918 260 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 APOA2P02652 100 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 NCS1P62166 190 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 FHL3Q13643 280 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 C19orf54Q5BKX5 351 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 ASPHD1Q5U4P2 390 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 HACD4Q5VWC8 232 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 PPP1R27Q86WC6 154 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 CROCCP3Q8IVE0 287 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 FLYWCH2Q96CP2 140 aaKnown RBP12.34□□□□□ -0.43
CDK4-215ENST00000553237 TSNAXQ99598 290 aaKnown RBP12.34□□□□□ -0.43
CDK4-215ENST00000553237 CABLES2Q9BTV7 478 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 TOLLIPQ9H0E2 274 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 OR2D2Q9H210 308 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDK4-215ENST00000553237 TPSG1Q9NRR2 321 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 SLC35D1Q9NTN3 355 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 ZMAT5Q9UDW3 170 aaKnown RBP12.34□□□□□ -0.43
CDK4-215ENST00000553237 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
CDK4-215ENST00000553237 NUBP2Q9Y5Y2 271 aa12.34□□□□□ -0.43
CDK4-215ENST00000553237 TRBV6-7A0A0A0MS04 114 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 TMEM235A6NFC5 223 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 SLC25A17O43808 307 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 TMEM127O75204 238 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 OR8U8P0C7N1 319 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 ECI1P42126 302 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 CRIP2P52943 208 aaPredicted RBP12.33□□□□□ -0.44
CDK4-215ENST00000553237 VBP1P61758 197 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 ZNF616Q08AN1 781 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 TMEM267Q0VDI3 215 aaPredicted RBP12.33□□□□□ -0.44
CDK4-215ENST00000553237 ZNF260Q3ZCT1 412 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 ACTBL2Q562R1 376 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 UNQ5815/PRO19632Q6UWF5 114 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 ZNF562Q6V9R5 426 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 PDPNQ86YL7 162 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.33□□□□□ -0.44
CDK4-215ENST00000553237 LFNGQ8NES3 379 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 MS4A10Q96PG2 267 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 PRR25Q96S07 402 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 GINS4Q9BRT9 223 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 MRPS26Q9BYN8 205 aaKnown RBP12.33□□□□□ -0.44
CDK4-215ENST00000553237 SDHAF2Q9NX18 166 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 SCOCQ9UIL1 159 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 SPATA2Q9UM82 520 aa12.33□□□□□ -0.44
CDK4-215ENST00000553237 RBM7Q9Y580 266 aaKnown RBP12.33□□□□□ -0.44
CDK4-215ENST00000553237 TRAV18A0A075B6X5 111 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 IGKV1D-8A0A087WSZ0 117 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 RAMP3O60896 148 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 DTYMKP23919 212 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 GNG2P59768 71 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 RUNX1Q01196 453 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 CD69Q07108 199 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 SRSF7Q16629 238 aaKnown RBP eCLIP12.32□□□□□ -0.44
CDK4-215ENST00000553237 C11orf87Q6NUJ2 197 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 GRPEL2Q8TAA5 225 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 NUDCD2Q8WVJ2 157 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 C5orf30Q96GV9 206 aa12.32□□□□□ -0.44
CDK4-215ENST00000553237 ST6GALNAC5Q9BVH7 336 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms