RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 IL18Q14116 193 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 VMA21Q3ZAQ7 101 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 ABCA11PQ4W5N1 156 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 RNASE10Q5GAN6 216 aaKnown RBP8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 VAX1Q5SQQ9 334 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 SLC35E3Q7Z769 313 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 CENPVQ7Z7K6 275 aaPredicted RBP8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 Q8N6K4 173 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 C5orf56Q8N8D9 126 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 NPBQ8NG41 125 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 OR4X2Q8NGF9 303 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 OR4S2Q8NH73 311 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 ZNF486Q96H40 463 aaPredicted RBP8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 TMEM68Q96MH6 324 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 MRPL20Q9BYC9 149 aaKnown RBP8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 SLIRPQ9GZT3 109 aaKnown RBP8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 NXF2Q9GZY0 626 aaKnown RBP8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 FAM212BQ9NTI7 297 aaPredicted RBP8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 SLC35D1Q9NTN3 355 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 MTFP1Q9UDX5 166 aa8.2□□□□□ -1.1
TRAFD1-208ENST00000552890 H0YJW9 148 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 RBFOX2O43251 390 aaKnown RBP eCLIP8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 CHST1O43916 411 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 ACTL6BO94805 426 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 ATG12O94817 140 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 HRASP01112 189 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 IGHG2P01859 326 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 MDKP21741 143 aaPredicted RBP8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 NFYAP23511 347 aaPredicted RBP8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 UCP3P55916 312 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 RPS16P62249 146 aaKnown RBP8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 HNF4GQ14541 408 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 ZNF660Q6AZW8 331 aaPredicted RBP8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 LIN54Q6MZP7 749 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 CCBE1Q6UXH8 406 aaPredicted RBP8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 Q6ZPA2 131 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 TMEM229BQ8NBD8 167 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 ZFAND1Q8TCF1 268 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 SMIM4Q8WVI0 70 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 WFDC12Q8WWY7 111 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 MAFIPQ8WZ33 124 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 SLC5A7Q9GZV3 580 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 ZNF702PQ9H963 129 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 SDHAF2Q9NX18 166 aa8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 RBMX2Q9Y388 322 aaKnown RBP8.19□□□□□ -1.1
TRAFD1-208ENST00000552890 DISC1C4P0D8 188 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 CTDSP2O14595 271 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 RRHO14718 337 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 SHOXO15266 292 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 GSTZ1O43708 216 aaPredicted RBP8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 NDUFA3O95167 84 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 HLA-DRB1P01911 266 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 FCER2P06734 321 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 FGF2P09038 288 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 VDAC1P21796 283 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 CD24P25063 80 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 DUTP33316 252 aaKnown RBP8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 HRH1P35367 487 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 RELBQ01201 579 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 C5orf64Q2M2E5 130 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 C2orf68Q2NKX9 166 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 RPL39P5Q59GN2 51 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 C9orf152Q5JTZ5 239 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 FAM131AQ6UXB0 335 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 KCTD9Q7L273 389 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 LAX1Q8IWV1 398 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 SLC38A6Q8IZM9 456 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 FAM71E2Q8N5Q1 922 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 GVQW1Q8N7I0 195 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 TEX45Q8NA69 505 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 SECTM1Q8WVN6 248 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 MOB3AQ96BX8 217 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 PRRT1Q99946 306 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 RBM38Q9H0Z9 239 aaKnown RBP8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 SCP2D1Q9UJQ7 156 aa8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 ELF5Q9UKW6 265 aaPredicted RBP8.18□□□□□ -1.1
TRAFD1-208ENST00000552890 CUBNO60494 3623 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 IGHV3-72A0A0B4J1Y9 119 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 GPR31O00270 319 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 IGF1P05019 195 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 VSIG10L2P0DP72 767 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 AADACP22760 399 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 HLA-DMAP28067 261 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 TNFSF8P32971 234 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 ETV6P41212 452 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 INPP1P49441 399 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 BLCAPP62952 87 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 SRSF2Q01130 221 aaKnown RBP8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 DIAPH2-AS1Q14236 149 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 SURF2Q15527 256 aaPredicted RBP8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 TMEM177Q53S58 311 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 UTF1Q5T230 341 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 TEX38Q6PEX7 206 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 ZNF562Q6V9R5 426 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 CADM3Q8N126 398 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 KLHDC1Q8N7A1 406 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 BVESQ8NE79 360 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 TCTEX1D2Q8WW35 142 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 SNAPC3Q92966 411 aa8.17□□□□□ -1.1
TRAFD1-208ENST00000552890 HARBI1Q96MB7 349 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms