RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 EIF5AL1Q6IS14 154 aaKnown RBP17.3■□□□□ 0.36
PRDM4-205ENST00000550376 TMEM182Q6ZP80 229 aaPredicted RBP17.3■□□□□ 0.36
PRDM4-205ENST00000550376 EIF4E3Q8N5X7 224 aaKnown RBP17.3■□□□□ 0.36
PRDM4-205ENST00000550376 SMIM8Q96KF7 97 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 SLC25A31Q9H0C2 315 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 ARV1Q9H2C2 271 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 C19orf12Q9NSK7 152 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 MMP24Q9Y5R2 645 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 ACACBO00763 2458 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 LOC105371267A0A1B0GV96 52 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 TMEM178BH3BS89 294 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 YPEL1O60688 119 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 ZNF273Q14593 569 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 SPANXN5Q5MJ07 72 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 TEX36Q5VZQ5 186 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 ATRAIDQ6UW56 229 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 YPEL2Q96QA6 119 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 GINS3Q9BRX5 216 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 EGLN1Q9GZT9 426 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 TMEM106BQ9NUM4 274 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 PSENENQ9NZ42 101 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 NDRG3Q9UGV2 375 aa17.3■□□□□ 0.36
PRDM4-205ENST00000550376 SPP1P10451 314 aa17.29■□□□□ 0.36
PRDM4-205ENST00000550376 ZNF616Q08AN1 781 aa17.29■□□□□ 0.36
PRDM4-205ENST00000550376 EDARADDQ8WWZ3 215 aa17.29■□□□□ 0.36
PRDM4-205ENST00000550376 ZDHHC16Q969W1 377 aa17.29■□□□□ 0.36
PRDM4-205ENST00000550376 AKAP6Q13023 2319 aa17.29■□□□□ 0.36
PRDM4-205ENST00000550376 CD55P08174 381 aa17.29■□□□□ 0.36
PRDM4-205ENST00000550376 CCL3L1P16619 93 aa17.29■□□□□ 0.36
PRDM4-205ENST00000550376 ATP6V0CP27449 155 aa17.29■□□□□ 0.36
PRDM4-205ENST00000550376 SLC25A10Q9UBX3 287 aaPredicted RBP17.29■□□□□ 0.36
PRDM4-205ENST00000550376 PPIAL4EA0A075B759 164 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 PPIAL4DF5H284 164 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 PRH1P02810 166 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 PPIAL4FP0DN26 164 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 SLC25A6P12236 298 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 PPIAL4AQ9Y536 164 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 VSTM5A8MXK1 200 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 KRBOX1C9JBD0 128 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 APOBEC3AP31941 199 aaPredicted RBP17.28■□□□□ 0.36
PRDM4-205ENST00000550376 PLA2G5P39877 138 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 UBE2KP61086 200 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 H1FXQ92522 213 aaKnown RBP17.28■□□□□ 0.36
PRDM4-205ENST00000550376 RBKSQ9H477 322 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 SEBOXQ9HB31 216 aaPredicted RBP17.28■□□□□ 0.36
PRDM4-205ENST00000550376 GFOD1Q9NXC2 390 aa17.28■□□□□ 0.36
PRDM4-205ENST00000550376 F12P00748 615 aaPredicted RBP17.27■□□□□ 0.36
PRDM4-205ENST00000550376 OR2B8PP59922 312 aa17.27■□□□□ 0.36
PRDM4-205ENST00000550376 RPL23AP62750 156 aaKnown RBP17.27■□□□□ 0.36
PRDM4-205ENST00000550376 SWI5Q1ZZU3 235 aa17.27■□□□□ 0.36
PRDM4-205ENST00000550376 LYG1Q8N1E2 194 aa17.27■□□□□ 0.36
PRDM4-205ENST00000550376 HSD17B10Q99714 261 aaKnown RBP17.27■□□□□ 0.36
PRDM4-205ENST00000550376 MARCH11A6NNE9 402 aa17.27■□□□□ 0.35
PRDM4-205ENST00000550376 LY6HO94772 140 aa17.27■□□□□ 0.35
PRDM4-205ENST00000550376 DEFA5Q01523 94 aa17.27■□□□□ 0.35
PRDM4-205ENST00000550376 H2BFWTQ7Z2G1 175 aa17.27■□□□□ 0.35
PRDM4-205ENST00000550376 HAPLN4Q86UW8 402 aa17.27■□□□□ 0.35
PRDM4-205ENST00000550376 DIRC2Q96SL1 478 aa17.27■□□□□ 0.35
PRDM4-205ENST00000550376 FAM212BQ9NTI7 297 aaPredicted RBP17.27■□□□□ 0.35
PRDM4-205ENST00000550376 SAA2-SAA4A0A096LPE2 208 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 TRAV38-1A0A0B4J264 116 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 P0C879 139 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 SAA2P0DJI9 122 aaPredicted RBP17.26■□□□□ 0.35
PRDM4-205ENST00000550376 TNFRSF9Q07011 255 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 ZNF66Q6ZN08 573 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 OR2G3Q8NGZ4 309 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 RAB40CQ96S21 281 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 TREM1Q9NP99 234 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 TANC2Q9HCD6 1990 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 TOR1AO14656 332 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 NUPL2O15504 423 aaKnown RBP17.26■□□□□ 0.35
PRDM4-205ENST00000550376 SEC11BP0C7V7 166 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 RPL31P62899 125 aaKnown RBP17.26■□□□□ 0.35
PRDM4-205ENST00000550376 MIDNQ504T8 468 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 MMP26Q9NRE1 261 aa17.26■□□□□ 0.35
PRDM4-205ENST00000550376 OR9G9P0C7N8 305 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 DANCRP0C864 163 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 PRB3Q04118 309 aaPredicted RBP17.25■□□□□ 0.35
PRDM4-205ENST00000550376 BTN1A1Q13410 526 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 OR8G2PQ6IF36 304 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 BTNL8Q6UX41 500 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 STX12Q86Y82 276 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 R3HDM4Q96D70 268 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 SAT2Q96F10 170 aaPredicted RBP17.25■□□□□ 0.35
PRDM4-205ENST00000550376 CTSZQ9UBR2 303 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 CACFD1Q9UGQ2 172 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 HCFC1P51610 2035 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 TRAV3A0A0B4J244 114 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 ZG16O60844 167 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 ADCYAP1P18509 176 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 CAMLGP49069 296 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 SULT1A1P50225 295 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 PJVKQ0ZLH3 352 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 MUC15Q8N387 334 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 FAM213BQ8TBF2 198 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 MS4A5Q9H3V2 200 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 WSB1Q9Y6I7 421 aa17.25■□□□□ 0.35
PRDM4-205ENST00000550376 C9JQL5 133 aa17.24■□□□□ 0.35
PRDM4-205ENST00000550376 COL8A2P25067 703 aa17.24■□□□□ 0.35
PRDM4-205ENST00000550376 PRORYQ9H606 182 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms