RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 RRASP10301 218 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 CD83Q01151 205 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 SPCS2Q15005 226 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 OR5AP2Q8NGF4 316 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 SNAPC3Q92966 411 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 FLYWCH2Q96CP2 140 aaKnown RBP20.49■□□□□ 0.87
CPSF6-205ENST00000550075 RITA1Q96K30 269 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 HSPB9Q9BQS6 159 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 SCPEP1Q9HB40 452 aa20.49■□□□□ 0.87
CPSF6-205ENST00000550075 TCRBV4S1A1TA0A5B7 111 aa20.48■□□□□ 0.87
CPSF6-205ENST00000550075 J3QRK9 145 aa20.48■□□□□ 0.87
CPSF6-205ENST00000550075 OR5H8P0DN80 308 aa20.48■□□□□ 0.87
CPSF6-205ENST00000550075 TAS2R46P59540 309 aa20.48■□□□□ 0.87
CPSF6-205ENST00000550075 RPS16P62249 146 aaKnown RBP20.48■□□□□ 0.87
CPSF6-205ENST00000550075 CDK10Q15131 360 aa20.48■□□□□ 0.87
CPSF6-205ENST00000550075 KHDC1LQ5JSQ8 128 aa20.48■□□□□ 0.87
CPSF6-205ENST00000550075 LIN54Q6MZP7 749 aa20.48■□□□□ 0.87
CPSF6-205ENST00000550075 LINC00527Q9UJ94 153 aa20.48■□□□□ 0.87
CPSF6-205ENST00000550075 ZNF580Q9UK33 172 aa20.48■□□□□ 0.87
CPSF6-205ENST00000550075 ANAPC10Q9UM13 185 aa20.48■□□□□ 0.87
CPSF6-205ENST00000550075 TSSC4Q9Y5U2 329 aaPredicted RBP20.48■□□□□ 0.87
CPSF6-205ENST00000550075 FCER2P06734 321 aa20.47■□□□□ 0.87
CPSF6-205ENST00000550075 VDAC1P21796 283 aa20.47■□□□□ 0.87
CPSF6-205ENST00000550075 FCGR2CP31995 323 aa20.47■□□□□ 0.87
CPSF6-205ENST00000550075 SNX29P2Q8IUI4 249 aa20.47■□□□□ 0.87
CPSF6-205ENST00000550075 OR4F17Q8NGA8 305 aa20.47■□□□□ 0.87
CPSF6-205ENST00000550075 C5orf30Q96GV9 206 aa20.47■□□□□ 0.87
CPSF6-205ENST00000550075 OR4F4Q96R69 305 aa20.47■□□□□ 0.87
CPSF6-205ENST00000550075 FBXL15Q9H469 300 aa20.47■□□□□ 0.87
CPSF6-205ENST00000550075 CCDC59Q9P031 241 aaKnown RBP20.47■□□□□ 0.87
CPSF6-205ENST00000550075 ADAM30Q9UKF2 790 aa20.47■□□□□ 0.87
CPSF6-205ENST00000550075 IGKV1-16P04430 117 aa20.46■□□□□ 0.87
CPSF6-205ENST00000550075 DUTP33316 252 aaKnown RBP20.46■□□□□ 0.87
CPSF6-205ENST00000550075 LINC00205P59089 165 aa20.46■□□□□ 0.87
CPSF6-205ENST00000550075 HIST2H2BDQ6DRA6 164 aa20.46■□□□□ 0.87
CPSF6-205ENST00000550075 ZNF329Q86UD4 541 aa20.46■□□□□ 0.87
CPSF6-205ENST00000550075 FAM110DQ8TAY7 271 aaPredicted RBP20.46■□□□□ 0.87
CPSF6-205ENST00000550075 C15orf40Q8WUR7 153 aa20.46■□□□□ 0.87
CPSF6-205ENST00000550075 METTL1Q9UBP6 276 aaKnown RBP20.46■□□□□ 0.87
CPSF6-205ENST00000550075 RBMX2Q9Y388 322 aaKnown RBP20.46■□□□□ 0.87
CPSF6-205ENST00000550075 LINC01548A6NM66 108 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 SULT1C2O00338 296 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 RGS5O15539 181 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 TPPPO94811 219 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 IGF1P05019 195 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 LGALS7P47929 136 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 C10orf99Q6UWK7 81 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 KCTD9Q7L273 389 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 OR5H2Q8NGV7 314 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 GPX8Q8TED1 209 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 ISOC1Q96CN7 298 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 HARBI1Q96MB7 349 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 OR51J1Q9H342 316 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 PARP11Q9NR21 331 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 EHFQ9NZC4 300 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 EXTL2Q9UBQ6 330 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 PRELID3BQ9Y3B1 194 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 VWFP04275 2813 aa20.45■□□□□ 0.86
CPSF6-205ENST00000550075 IGKV1D-13A0A0B4J2D9 117 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 PPYP01298 95 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 IGKV1-13P0DP09 117 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 NAT1P18440 290 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 AADACP22760 399 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 HERV-K104P61576 105 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 PSG5Q15238 335 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 MSMO1Q15800 293 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 TCTEX1D4Q5JR98 221 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 BVESQ8NE79 360 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 SECTM1Q8WVN6 248 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 R3HDM4Q96D70 268 aa20.44■□□□□ 0.86
CPSF6-205ENST00000550075 HSD17B10Q99714 261 aaKnown RBP20.44■□□□□ 0.86
CPSF6-205ENST00000550075 A0A1W2PRX2 142 aa20.43■□□□□ 0.86
CPSF6-205ENST00000550075 H3BMQ9 156 aa20.43■□□□□ 0.86
CPSF6-205ENST00000550075 SHOXO15266 292 aa20.43■□□□□ 0.86
CPSF6-205ENST00000550075 RCVRNP35243 200 aa20.43■□□□□ 0.86
CPSF6-205ENST00000550075 TMEM177Q53S58 311 aa20.43■□□□□ 0.86
CPSF6-205ENST00000550075 ZNF660Q6AZW8 331 aaPredicted RBP20.43■□□□□ 0.86
CPSF6-205ENST00000550075 TEX38Q6PEX7 206 aa20.43■□□□□ 0.86
CPSF6-205ENST00000550075 DYNC2LI1Q8TCX1 351 aa20.43■□□□□ 0.86
CPSF6-205ENST00000550075 GIMAP1Q8WWP7 306 aa20.43■□□□□ 0.86
CPSF6-205ENST00000550075 BORCS5Q969J3 196 aa20.43■□□□□ 0.86
CPSF6-205ENST00000550075 IGHV7-81A0A0B4J1V7 117 aa20.42■□□□□ 0.86
CPSF6-205ENST00000550075 ADARB2-AS1A8MUL3 147 aa20.42■□□□□ 0.86
CPSF6-205ENST00000550075 DDB2Q92466 427 aa20.42■□□□□ 0.86
CPSF6-205ENST00000550075 CCDC160A6NGH7 325 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 LINC00473A8K010 186 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 ATP6V0E1O15342 81 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 SLC25A17O43808 307 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 PF4V1P10720 104 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 FXYD4P59646 89 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 DYRK1AQ13627 763 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 CXorf66Q5JRM2 361 aaPredicted RBP20.41■□□□□ 0.86
CPSF6-205ENST00000550075 ZNF66Q6ZN08 573 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 OVCH2Q7RTZ1 564 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 ZBTB34Q8NCN2 500 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 ABHD5Q8WTS1 349 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 SLC5A7Q9GZV3 580 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 ZFP57Q9NU63 452 aa20.41■□□□□ 0.86
CPSF6-205ENST00000550075 CRYZL1O95825 349 aa20.4■□□□□ 0.86
CPSF6-205ENST00000550075 FOXE3Q13461 319 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms