RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 UBQLN2Q9UHD9 624 aa6.56□□□□□ -1.36
UBE2N-203ENST00000549490 LRP1BQ9NZR2 4599 aa6.56□□□□□ -1.36
UBE2N-203ENST00000549490 APOBP04114 4563 aaKnown RBP6.55□□□□□ -1.36
UBE2N-203ENST00000549490 TRAV25A0A0B4J276 109 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 FAM90A7PA6NKC0 464 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 ITGB1BP1O14713 200 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 MFAP2P55001 183 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 PPP3R1P63098 170 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 MRGPRG-AS1Q2M3A8 158 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 SLC25A30Q5SVS4 291 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 OR2C3Q8N628 320 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 ZNF645Q8N7E2 425 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 MAPKAPK5-AS1Q8N8E1 139 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 ORAI1Q96D31 301 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 PHB2Q99623 299 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 ZNF184Q99676 751 aaPredicted RBP6.55□□□□□ -1.36
UBE2N-203ENST00000549490 RARRES2Q99969 163 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 SELENOIQ9C0D9 397 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 C11orf54Q9H0W9 315 aaPredicted RBP6.55□□□□□ -1.36
UBE2N-203ENST00000549490 C11orf68Q9H3H3 251 aaKnown RBP6.55□□□□□ -1.36
UBE2N-203ENST00000549490 BANF2Q9H503 90 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 MAP6D1Q9H9H5 199 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 ABRACLQ9P1F3 81 aa6.55□□□□□ -1.36
UBE2N-203ENST00000549490 DMBT1Q9UGM3 2413 aaPredicted RBP6.55□□□□□ -1.36
UBE2N-203ENST00000549490 ZNF320A2RRD8 509 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 SRRM4A7MD48 611 aaKnown RBP6.54□□□□□ -1.36
UBE2N-203ENST00000549490 A8MWP6 167 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 G3V2T6 193 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 M0R2N4 97 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 PDCD6O75340 191 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 OR2J3O76001 311 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 S1PR2O95136 353 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 APOA2P02652 100 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 CD2P06729 351 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 T-ENOLP0DO92 83 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 CAPGP40121 348 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 C15orf32Q32M92 178 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 TMEM177Q53S58 311 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 GLIPR1L1Q6UWM5 242 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 RBPMS2Q6ZRY4 209 aaKnown RBP6.54□□□□□ -1.36
UBE2N-203ENST00000549490 SPATA24Q86W54 205 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 SLC38A6Q8IZM9 456 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 SYS1Q8N2H4 156 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 NECAP1Q8NC96 275 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 GPR148Q8TDV2 347 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 MUL1Q969V5 352 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 LGALS12Q96DT0 336 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 Q96M66 194 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 CIB1Q99828 191 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 SLC35D1Q9NTN3 355 aa6.54□□□□□ -1.36
UBE2N-203ENST00000549490 EXOGQ9Y2C4 368 aaKnown RBP6.54□□□□□ -1.36
UBE2N-203ENST00000549490 EXOSC1Q9Y3B2 195 aaKnown RBP6.54□□□□□ -1.36
UBE2N-203ENST00000549490 TCRBV3S1A0A5B6 114 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 DEFB4AO15263 64 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 MPPED1O15442 326 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 CDK2AP2O75956 126 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 C8orf88P0DMB2 117 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 MGMTP16455 207 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 IGFBP3P17936 291 aaPredicted RBP6.53□□□□□ -1.36
UBE2N-203ENST00000549490 MAP2K4P45985 399 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 GTF2A1P52655 376 aaPredicted RBP6.53□□□□□ -1.36
UBE2N-203ENST00000549490 GBX2P52951 348 aaPredicted RBP6.53□□□□□ -1.36
UBE2N-203ENST00000549490 MRPL28Q13084 256 aaKnown RBP6.53□□□□□ -1.36
UBE2N-203ENST00000549490 ODF3L2Q3SX64 289 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 FAM106AQ4KMX7 169 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 FAM209BQ5JX69 171 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 OR11H2Q8NH07 326 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 MRPL48Q96GC5 212 aaKnown RBP6.53□□□□□ -1.36
UBE2N-203ENST00000549490 OR1A1Q9P1Q5 309 aa6.53□□□□□ -1.36
UBE2N-203ENST00000549490 C11orf94C9JXX5 98 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 CRTAPO75718 401 aaPredicted RBP6.52□□□□□ -1.37
UBE2N-203ENST00000549490 DCTN3O75935 186 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 IGHV3-23P01764 117 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 ARL3P36405 182 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 CEACAM6P40199 344 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 TNXAQ16473 311 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 PRSS8Q16651 343 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 OR4A47Q6IF82 309 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 ZNF880Q6PDB4 577 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 CLEC19AQ6UXS0 136 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 UNQ9165/PRO28630Q6UXU0 137 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 SVOPQ8N4V2 548 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 TTC9CQ8N5M4 171 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 POM121L12Q8N7R1 296 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 TRUB1Q8WWH5 349 aaKnown RBP6.52□□□□□ -1.37
UBE2N-203ENST00000549490 EDARADDQ8WWZ3 215 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 SRSF12Q8WXF0 261 aaKnown RBP6.52□□□□□ -1.37
UBE2N-203ENST00000549490 PTX4Q96A99 478 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 GALNT14Q96FL9 552 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 HARBI1Q96MB7 349 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 MYCBPQ99417 103 aaPredicted RBP6.52□□□□□ -1.37
UBE2N-203ENST00000549490 SPAG8Q99932 426 aaPredicted RBP6.52□□□□□ -1.37
UBE2N-203ENST00000549490 FAAP24Q9BTP7 215 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 THTPAQ9BU02 230 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 GABARAPL3Q9BY60 117 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 GABARAPL1Q9H0R8 117 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 CSTL1Q9H114 145 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 ERVK13-1Q9NX77 482 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 ZNF221Q9UK13 617 aa6.52□□□□□ -1.37
UBE2N-203ENST00000549490 DNAH5Q8TE73 4624 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms